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Preface xv
Acknowledgments xxi
Part I The Dynamics of Neurological Disease 1
1 The Dynamics of Neurological Disease: Current Views and Key Issues 3
1.1 Introduction 4
1.2 The Complexity of Human Neurological Diseases 4
1.3 The Nervous System as an Archetypical Complex System 9
1.4 CNS Signaling Failures: Implications for Neurological Disease 14
1.5 History and Key Characteristics of the Age-Dependent Neurological Diseases 14
1.6 The Fractal Nature of Complexity in the CNS 16
Endnotes 17
2 Clinical and Economic Features of Age-Related Neurological Diseases 19
2.1 Introduction 19
2.2 Parkinson's Disease 19
2.3 Amyotrophic Lateral Sclerosis 29
2.4 Alzheimer's Disease 40
2.5 Summary of the Data on the Progressive, Age-Related Neurological Diseases 47
2.6 Neural Loci and Mechanisms of Action 48
Endnote 49
3 Spectrums of Neurological Disease, Clusters, and Ubiquity 51
3.1 Introduction 51
3.2 Spectrums of Neurological Disease 51
3.3 The Dimension of the Problem when Assessing Potential Causal Factors in Neurological Diseases 54
3.4 Neurological Disease Clusters 57
3.5 Ubiquity 60
3.6 Nested Complex Systems: Proximal versus Distal Events as They May Relate to Neurological Diseases 60
3.7 The Path to "Curing" Neurological Diseases 63
4 Complexity, Cascading Failures, and Neurological Diseases 67
4.1 Introduction 67
4.2 Introduction to Complexity Theory and Complex Systems 67
4.3 Computer Programs and Computer Crashes 69
4.4 Biosemiosis in the CNS (Part 1) 70
4.5 Complexity in the CNS and the Impact of Genetic and Environmental Insults 73
4.6 Tipping Points and Time Lines of Disease Progression 77
5 Genetic Determinants of Neurological Disease 79
5.1 Introduction 80
5.2 Causality versus Coincidence 80
5.3 Actions of Mutant Genes in Neurological Disease 82
5.4 Genetic Mutations Linked to Parkinson's Disease 84
5.5 Genetic Mutations Linked to ALS 86
5.6 Genetic Mutations Linked to Alzheimer's Disease 92
5.7 Genes and Neurological Disease: Some General Considerations 94
6 Environmental Determinants of Neurological Disease and Gene-Toxin Interactions 97
6.1 Introduction 98
6.2 Toxins and Neurological Diseases 98
6.3 Aluminum and Neurological Disease 101
6.4 Single- vs. Multiple-Hit Models of Neurological Disease: Gene-Toxin Interactions 114
6.5 Genetic Susceptibility Factors 117
6.6 Biosemiosis (Part 2) 123
6.7 Gene-Toxin Interactions and Cascading Failures 124
6.8 Genes and Toxins in Neurological Disease: Penultimate Thoughts 124
6.9 And, Finally, the Microbiome 125
Endnote 125
7 The Mystery and Lessons of ALS-PDC 127
7.1 Introduction 127
7.2 Neurological Disease Clusters and ALS-PDC 128
7.3 History and Features of ALS-PDC 129
7.4 Cycad and ALS-PDC 135
7.5 Amino Acid Toxins in Cycad and ALS-PDC 140
7.6 Non-Amino Acid Toxins Linked to ALS-PDC 143
7.7 Aluminum and Ionic Etiologies for ALS-PDC 147
7.8 Still Other Molecules Causal to ALS-PDC 148
7.9 What is the Current View on the Importance of ALS-PDC? 148
7.10 Complexity of Neurological Diseases as Viewed from Guam 151
Endnote 151
Part II Age and Time Lines of Neurological Disease 153
8 Neurological Disease Models and their Discontents: Validity, Replicability, and the Decline Effect 155
8.1 Introduction 155
8.2 Modeling Human Neurological Diseases: Possibilities and Pitfalls 156
8.3 Considerations Regarding Model Systems 158
8.4 Model Systems and their Discontents 159
8.5 Is There an Ideal Model for Studying Neurological Diseases? General Considerations 168
8.6 Specific Considerations for Ideal Model-System Approaches in ALS 170
8.7 Alternative Views of Neurological Disease and Model-Systems Approaches: Multiple-Hit Etiologies 172
9 The Progression and the Time Line of Neurological Disease 175
9.1 Introduction 175
9.2 Creating Disease Time Lines: The Framingham Study 176
9.3 Time Lines of Neurological Disease 176
9.4 Back to a Multiple-Hit Disease Consideration 180
9.5 Haecceity and Quiddity in Context to Biosemiosis and Multiple Hits 181
9.6 Some Final Thoughts on Time Lines of Neurological Disease: Differentiation and Neurogenesis 182
Endnote 183
10 Development, Aging, and Neurological Disease 185
10.1 Introduction 185
10.2 The Fetal Basis of Adult Disease Hypothesis 186
10.3 ASD as a Developmental Neurological Disorder 188
10.4 Toxins and Developmental CNS Disorders 193
10.5 Developmental versus Mature CNS Disorders 193
Endnotes 194
Part III Interactions and Synergies in Neurological Disease 195
11 CNS-Immune System Interactions and Autoimmunity 197
11.1 Introduction 198
11.2 Immunity and the CNS, an Introduction to a Complex Topic 198
11.3 CNS-Immune System Interactions: More Detailed Considerations 202
11.4 Autoimmunity 205
11.5 Immune System Signaling Errors and Autoimmunity in ASD and Other Neurological Disorders 208
11.6 Laterality and Autoimmunity in Neurological Diseases 212
11.7 Other System Disorders in Neurological Diseases: More Evidence for Autoimmunity? 215
11.8 Are There Infectious Disease Links to Neurological Diseases? 215
12 The Impact of Synergy of Factors in Neurological Disease 219
12.1 Introduction 219
12.2 Synergistic and Additive Effects in General and as Applied to CNS Diseases 219
12.3 Gene-Environment (Toxin) Interactions in Non-neuronal Systems 221
12.4 Gene-Environment (Toxin) Interactions in Neurological Disease 224
12.5 Levels of Complexity in Gene-Toxin Interactions: Implications for Current and Future Therapeutics 226
Part IV Transition and Politics in Neurological Disease 229
13 The Current Status of Neurological Disease Treatments 231
13.1 Introduction 231
13.2 Current Therapeutic Approaches to Treating Neurological Diseases 232
13.3 Summary 242
Endnote 243
14 The Future of Translational Research in Neurological Disease 245
14.1 Introduction 245
14.2 Comparing Traumatic Brain Injury to Neurological Diseases 246
14.3 ALS and Polio: Comparing the Nature of Neural Degeneration and Progression in the Two Diseases 249
14.4 Neurological Diseases as Spectrum Disorders: Implications for Therapy 252
14.5 Cystic Fibrosis and Gene Therapy 254
14.6 Restoring CNS Function: What is the Bottom Line? 255
14.7 Biosemiosis (Part 3) and True Narrative Representations 255
15 Defining the Limits for Neurological Disease Treatments 259
15.1 Introduction 259
15.2 The Complexity of the Human CNS versus One View of the Philosophy of Science 260
15.3 Examples of Unique Individuality: From Pilgrimages to Nature 261
15.4 Therapeutic Windows for the Treatment of Neurological Diseases 266
Endnotes 270
16 The Politics and Economics of Neurological Disease 271
16.1 Introduction 271
16.2 The Problems with Single-Hit Models of Neurological Disease 272
16.3 Summarizing the Main Themes by Chapter 274
16.4 Can the Amount of Money Spent Change these Outcomes for Neurological Disease Treatment? 276
16.5 General Considerations for the Future of Neurological Disease Research 280
16.6 The Advent of Modern Dentistry and Dental Prophylaxis 284
16.7 Addressing Neurological Diseases at the Individual and Population Levels 286
Endnotes 290
Glossary 291
References 301
Index 355
"Babylon in all its desolation is a sight not so awful as that of the human mind in ruins."
Scrope Berdmore Davies1
"I can face death, but I cannot face watching myself disappear from within.I don't know who I am anymore."
Claude Jutra2
Each annual meeting of the Society for Neuroscience (SfN) is, for me, once more a reminder just how reductionist the field of neuroscience has been, continues to be, and apparently is destined to remain.
Anyone who has gone to this conference, or any similar type of large meeting, cannot help but be overwhelmed by the sheer quantity of the information on display. During the three and a half days of the main SfN meeting, some 30 000 participants will present over 15 000 posters along with almost 13 000 talks of various lengths. These numbers were the projected figures for the 2014 conference in Washington, DC, but other SfN conferences of the recent past will have been much the same in size. Future conferences will likely be even larger.
Most of the talks at the meeting occur in the so-called "mini"- and "nano"-symposia which feature 15-minute-long presentations, each usually containing a small body of data and its preliminary interpretation. However, the poster sessions really show the true dimensions of the conference: seven 4-hour-long sessions, each filling an area the size of several football fields.
Each poster, or mini-talk, contains a snippet of information - almost all of it, as noted, preliminary - a lot of which will turn out to be conceptually flawed in design or experimentally incorrect. Much of the time, as the lack of later publications bears out, the work is simply not reproducible. This outcome is in accord with studies by various scholars who have noted a lack of reproducibility in experimental data of all kinds, perhaps particularly often in the biomedical sciences.
Multiply these numbers by the additional numbers of people and presentations at conferences in neurology or more specialist neurological diseases, multiply again by the number of years these conferences have all been going on, and one likely gets billions of words and millions of tons of paper in a virtual tidal wave of information, which, combined with endless time spent by a great variety of otherwise quite talented scientists, actually produces what, at the end of the day, amounts to relatively little useful information about neurological diseases. Further, very little of this information is actually sorted, compiled, or cross-checked internally or externally with the previous decades of results from all of the similar meetings.
What then are the outcomes for neurological disease remediation? First, the field still does not understand the etiology of most neurological diseases, and, as a consequence, it has only a very limited means of translating what it thinks it knows into treatments that actually halt the progression of - never mind "cure" - these diseases.
The problem here is therefore obviously not one of quantity, or even in many cases of quality. Rather, the problem is that the field still cannot answer some really fundamental questions about the diseases in question and therefore cannot come up with treatments that make a lot of sense mechanistically or, at the very least, do what they are intended to do. Maybe what this really means is that the field of neurological disease research is not asking the right questions, or that it does not know how to interpret the answers.
For me, the question is not how to (over) simplify the nervous system and its diseases, but rather how to understand them in their entirety. Admittedly, the task of understanding the former has proven quite difficult. The second goal clearly depends on accomplishing the first.
As other authors have pointed out in different contexts, attempts to "atomitize" a subject of study into ever smaller bits without any context to their inter-relationships can be enormously detrimental (see, for example, Gould and Lewontin, 1979). Further, should the field really expect that a system as complex as the nervous system will break down in a simple way, or should it expect that its pieces will, in some measure, reflect its overall innate complexity? Almost for sure, it is the latter. At least, this is the perspective I will take in the pages that follow. I should acknowledge here that my bias against overusing reductionist approaches when considering neurological disease origins in as complex a system as the human central nervous system (CNS) is very much the polar opposite to the tack taken by Dr. Christof Koch, one of the foremost theorists on human consciousness (see Koch, 2012). The latter subject is surely as complex as the breakdown of the CNS in neurological diseases, but there may be some common ground (see Chapter 14).
As will be discussed in this book, the origin, function, and diseases of the nervous system are, by their very nature, complex, and are highly interconnected amongst the various types of cells and regions affected. The concept of biosemiosis, or biological signaling, is in this context highly relevant, and it will be highlighted in much of the discussion that follows. Moreover, the diseases upon which this book will focus are "progressive," meaning that they continue to get worse in terms of nervous system pathology and functioning over time. They are also age-related and somewhat sex-dependent, are complicated by the added complexities of genetic variations, individual microbiomes, and a host of other likely contributing factors.
How all of these aspects combine to produce any neurological disease is actually something that neurological disease research has not really begun to understand. If the nervous system is constructed as a complex system both developmentally and functionally, which it decidedly is, then it is surely so when it malfunctions. In brief, those of us in what can broadly be described as the neurological disease "field," a term that will be used throughout the book, are in rather dire need of a conceptual frame shift.
Many scientists are hard at work to accomplish such a shift, but they are swimming against a powerful tide of overwhelming amounts of data, which, as noted earlier, are often incorrect. How, then, is one to sort the wheat from the chaff, the valid from the invalid?
This book is intended to help the process along. Inevitably, in so doing, it will annoy some of my neuroscience colleagues as it may seem to imply that all their myriad experiments - often with amazingly spectacular methodologies - are not going to get the field to any answers without reframing the questions. Techniques are, after all, merely the equivalent of tactics in a military setting, simply, in this case, the means to accomplish the larger strategic goal of understanding these diseases. The strategic goal is aimed at an end state of prevention (or of effective treatment, as the second-best option).
Understanding this end state is actually critical to our collective wellbeing, because these various diseases are threatening to overwhelm the medical systems of the developed nations. (As for the developing countries, their medical systems are in many cases in poor enough shape as is, and hardly need the added burden of increased neurological diseases.)
My hope is that Neural Dynamics of Neurological Disease will spark debate. Time will tell if this hope has been realized. While desirable, indeed essential, from my perspective, such an outcome is decidedly a long shot. Scientific journals and meetings such as the SfN have become major industries, and are often mired in dogma, with an apparently dominant philosophy that "more equates to better."
It is clear from the work of Prof. John Ioannidis and others that more is not necessarily better if the data are incorrect or interpreted incorrectly and/or are not verified by replication, or at least convergent forms of information. Thus, of the approximately 28 000 talks and poster presentations at SfN, some two-thirds (or more) will be incorrect, and virtually none will be replicated. This is a vastly larger problem than most of those in the field realize, and I will touch upon it further in Chapter 8.
It is reasonable to assume that much of what follows in this book will be controversial, not so much because the data are contested (although in many cases they are) but because the way I have chosen to put them together in particular categories leads to certain conclusions. Other authors, ordering the subjects in different ways, might reach very different outcomes. In this sense, the process of writing a book is a lot like museum curatorship in that what one chooses to put on display versus what one leaves in the basement will provide very different narratives. When writing about neurological diseases, how one collates and arranges the key subjects and lesser items shapes the presentation, and thus the conclusions. And, needless to say, all authors have their own assumptions, prejudices for or against certain hypotheses and data, and ways of viewing any particular field of study.
Given this, it seems only fair at the outset for me to state my own assumptions. These are listed in a sequence from what I hope will be the least controversial, "motherhood" sorts of assertions to those that perhaps deviate to a lesser or greater extent from mainstream concepts of the nervous system in disease. Each will be bolstered by the relevant literature in the appropriate places in the book's chapters.
One point to be addressed first, however, is the...
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