Legume Genomics

Legume pangenome construction using an iterative mapping and assembly approach.- Large-scale Identification of Transposon Insertion Polymorphisms in Leguminous Plants from Paired-End WGS Data.- Comprehensive Method for Soybean Cultivar Identification Using MGIseq, VCF2GENOME, and REST API.- Methods for Construction of Core Collections using SNP Markers.- Interspecific Hybridization Using Cicer Microphyllum Royle Ex Benth. for the Genomic Reconstruction of Cultivated Chickpea (Cicer arietinum L.).- Local haplotyping analysis for flowering time in soybean using crosshap.- Method for Genome-Wide Association Study: a soybean example.- Method to Establish Intergeneric or Interspecific Hybrids through Genomic In Situ Hybridization (GISH).- Method for dissection of genomic loci associated with chickpea root penetration traits in compact soil.- Method for ATAC Sequencing Data Analysis for Understanding Chromatin Biology in Legumes.- Protein Extraction Protocol for Legumes Compatible with Detergent - Gel Fractionation and Mass Spectrometry.- Isolation of cytoskeleton and cytoskeleton-bound polysome, and identification of cytoskeletal proteins from a grain legume.- A multi-omics approach for microbiome data analysis in legumes.- A computational pipeline for the identification of RNA virome in legumes.- Identification of tRNA-derived fragments in legumes.- Applications of the Soybean Expression Atlas in Genomics and Transcriptomics Research.- TAIL-PCR for Recovery of Tnt1 Flanking Sequences in Chickpea: A Tool for Functional Genomics Studies.- CRISPR/Cas9-Based Gene Editing in Soybean.- Expression Analysis of ROS Related Genes During Germination of Chickpea (Cicer Arietinum L.) Seeds.- Flow Cytometry and K-mer Based Approach for Genome Size Estimation of Clusterbean: A Case Study.