Machine Learning and Big Data-enabled Biotechnology

Part I - From DNA?
1 Deep learning approaches for synthetic biology part design
2 Automated approaches for GSM development from DNA sequence
3 Predictive models from genome sequences
Part II - ?.to Proteins?
4 De novo protein structure and design tools
5 Machine learning approaches for protein engineering
6 Pathway discovery / Retrobiosynthesis
7 Enzyme functional classifications
8 Proteomics machine learning approaches and de novo identification
Part III - ?to whole cells and beyond
9 Machine learning approaches for gene expression
10 Metabolomics big data approaches
11 Use of Generative AI and natural language processing for cell models
12 Metabolic production, strain engineering, and flux design
13 Automated function and learning in biofoundries/strain designs
14 Machine learning predictions of phenotype and bioreactor performance