
Hydrogen Bonding
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Content
- Intro
- Contents
- Abbreviations
- 1 QUANTUM CHEMICAL FRAMEWORK
- 1.1 Quantum Chemical Techniques
- 1.1.1 Basis Sets
- 1.1.2 Electron Correlation
- 1.1.3 Geometries
- 1.2 Definition of a Hydrogen Bond
- 1.2.1 Geometry
- 1.2.2 Energetics
- 1.2.3 Electronic Redistributions
- 1.2.4 Spectroscopic Observations
- 1.3 Quantum Chemical Characterization of Hydrogen Bonds
- 1.3.1 H-bond Geometries
- 1.3.2 Thermodynamic Quantities
- 1.3.3 Electronic Redistributions
- 1.3.4 Spectroscopic Observations
- 1.4 A Simple Example
- 1.5 Sources of Error
- 1.6 Basis Set Superposition
- 1.6.1 Secondary Superposition
- 1.6.2 Important Properties of Superposition Error
- 1.6.3 Historical Perspective
- 1.7 Energy Decomposition
- 1.7.1 Kitaura-Morokuma Scheme
- 1.7.2 Alternate Schemes
- 1.7.3 Perturbation Schemes
- 2 GEOMETRIES AND ENERGETICS
- 2.1 XH···ZH[sub(3)]
- 2.1.1 BSSE
- 2.1.2 Substituent Effects
- 2.2 XH···YH[sub(2)]
- 2.2.1 Comparative Aspects
- 2.2.2 Angular Features
- 2.2.3 Alternate Complexes and Geometries
- 2.2.4 Energy Components
- 2.3 HYH···ZH[sub(3)]
- 2.3.1 Substituents
- 2.4 XH···XH
- 2.5 HYH···YH[sub(2)]
- 2.5.1 Binding Energy of Water Dimer
- 2.5.2 Complexes Containing H[sub(2)]S
- 2.5.3 Substituent Effects
- 2.6 (ZH[sub(3)])[sub(2)]
- 2.7 Carbonyl Group
- 2.7.1 Substituent Effects
- 2.8 Carboxylic Acid
- 2.8.1 Carboxylic Acid Dimers
- 2.9 Nitrile
- 2.10 Imine
- 2.11 Amide
- 2.11.1 Interaction with Carboxylic Acid and Ester
- 2.12 Nucleic Acid Base Pairs
- 2.13 H-Bonds versus D-Bonds
- 2.13.1 Water Molecules
- 2.14 Summary
- 3 VIBRATIONAL SPECTRA
- 3.1 Method of Calculation
- 3.2 Accuracy Considerations
- 3.3 (HX)[sub(2)]
- 3.4 H[sub(3)]Z···HX
- 3.4.1 Analysis of Intensities
- 3.4.2 Anharmonicity
- 3.4.3 Other Properties
- 3.4.4 Relationship between H-Bond Strength and Spectra
- 3.5 H[sub(2)]Y···HX
- 3.5.1 Alkyl Substituents
- 3.5.2 Other Properties
- 3.6 H[sub(2)]Y···HYH
- 3.6.1 Polarizability
- 3.6.2 Comparison between (H[sub(2)]O)[sub(2)] and (H[sub(2)]S)[sub(2)]
- 3.6.3 Effects of Electron Correlation and Matrices
- 3.6.4 Substituent Effects
- 3.6.5 NMR spectra
- 3.7 Expected Accuracies
- 3.7.1 HF Dimer
- 3.7.2 Water Dimer
- 3.8 HYH···NH[sub(3)]
- 3.9 (NH[Sub(3)])[sub(2)]
- 3.10 Carbonyl Oxygen
- 3.10.1 Relationship between ?E and ?v
- 3.10.2 Formaldehyde + Water
- 3.10.3 Formaldehyde + HX
- 3.11 Imine
- 3.12 Nitrile
- 3.12.1 Correlation and Anharmonicity
- 3.12.2 HCN as Proton Donor
- 3.12.3 HCN Dimer
- 3.13 Amide
- 3.14 Summary
- 4 EXTENDED REGIONS OF POTENTIAL ENERGY SURFACE
- 4.1 Ammonia Dimer
- 4.2 H[sub(2)]O···HX
- 4.3 (HX)[sub(2)]
- 4.3.1 Anisotropies of Energy Components
- 4.3.2 Interconversion Pathways
- 4.3.3 HCl Dimer
- 4.4 Water Dimer
- 4.4.1 Characterization of Possible Minima and Stationary Points
- 4.4.2 Components of the Interaction Energy
- 4.5 Carbonyl Group
- 4.6 Amines
- 4.7 Summary
- 5 COOPERATIVE PHENOMENA
- 5.1 HCN Chains
- 5.1.1 Geometries
- 5.1.2 Energetics
- 5.1.3 Dipole Moments
- 5.1.4 Vibrational Spectra
- 5.1.5 Quadrupole Coupling Constants
- 5.1.6 Cyclic Chains
- 5.2 HCCH Aggregates
- 5.2.1 Trimers
- 5.2.2 Tetramers and Pentramers
- 5.3 Hydrogen Halides
- 5.3.1 Open versus Cyclic Trimers
- 5.3.2 Three-Body Interaction Energies
- 5.3.3 Larger Oligomers
- 5.4 Water
- 5.4.1 Extended Open Chains
- 5.4.2 Branching Clusters
- 5.4.3 Cyclic Oligomers
- 5.4.4 Identification of True Minima
- 5.4.5 Substituent Effects
- 5.5 Mixed Systems
- 5.5.1 Geometries
- 5.5.2 Energetics
- 5.5.3 Vibrational Spectra
- 5.5.4 Effects of Electron Correlation
- 5.5.5 Other Mixed Trimers
- 5.6 Summary
- 6 WEAK INTERACTIONS, IONIC H-BONDS, AND ION PAIRS
- 6.1 Weak Acceptors
- 6.1.1 Dihalogens
- 6.1.2 CO
- 6.1.3 CO[sub(2)]
- 6.1.4 NNO
- 6.1.5 SO[sub(2)]
- 6.1.6 CCl[sub(2)]
- 6.2 C-H as Proton Donor
- 6.2.1 Alkynes
- 6.2.2 Alkanes
- 6.2.3 Metal Atoms as Acceptors
- 6.2.4 Hydride as Proton Acceptor
- 6.3 Symmetric Ionic Hydrogen Bonds
- 6.3.1 Hydrogen Bihalides
- 6.3.2 Comparison with Other Anionic H-bonds
- 6.3.3 Cationic H-bonds
- 6.3.4 Comparisons between Cations and Anions
- 6.3.5 Alkyl Substituents
- 6.3.6 Other Considerations
- 6.4 Asymmetric Ionic Systems
- 6.4.1 General Principles
- 6.4.2 Test of Quantitative Relationships
- 6.5 Syn-Anti Competition in Carboxylate
- 6.5.1 Ab Initio Calculations
- 6.5.2 Experimental Findings
- 6.5.3 Carboxylic Group
- 6.5.4 Solvent Effects
- 6.5.5 Resolution of the Question
- 6.6 Neutral versus Ion Pairs
- 6.6.1 Amine-Hydrogen Halide
- 6.6.2 Carboxyl/Carboxylate Equilibrium
- 6.6.3 Experimental Confirmation
- 6.6.4 Long Chains
- 6.7 Summary
- 6.7.1 Low Polarity of Acceptor
- 6.7.2 C-H Donors
- 6.7.3 Ionic H-Bonds
- 6.7.4 Neutral Versus Ion Pairs
- Index of Complexes
- Subject Index
- A
- B
- C
- D
- E
- F
- G
- H
- I
- L
- M
- N
- O
- P
- Q
- R
- S
- T
- V
- W
- Z
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