Information Technology in Bio- and Medical Informatics

Name: Information Technology in Bio- and Medical Informatics | 7th International Conference, ITBAM 2016, Porto, Portugal, September 5-8, 2016, Proceedings
Brand: Springer
Price: 53.49 EUR
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7th International Conference, ITBAM 2016, Porto, Portugal, September 5-8, 2016, Proceedings

M. Elena Renda Miroslav Bursa Andreas Holzinger Sami Khuri(Editor)

Springer (Publisher)

Published on 5. August 2016

X, 253 pages

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978-3-319-43949-5 (ISBN)

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Content

Intro
Preface
Organization
Contents
Biomedical Data Analysis and Warehousing
What Do the Data Say in 10 Years of Pneumonia Victims? A Geo-Spatial Data Analytics Perspective
Abstract
1 Introduction
2 Related Work
3 Methodological Approach
4 Overview of the Available Data
5 Geo-Spatial Characterization of Pneumonia Victims
6 Conclusions and Future Work
Acknowledgement
References
Ontology-Guided Principal Component Analysis: Reaching the Limits of the Doctor-in-the-Loop
1 Introduction
2 Principal Component Analysis
3 Ontology-Guided PCA
3.1 Ontology-Guided Clinical Research Infrastructure
3.2 Background Processes
3.3 Implementation
4 Results
5 Discussion and Conclusion
6 Open Challenges and Future Work
References
Enhancing EHR Systems Interoperability by Big Data Techniques
1 Introduction
2 Background and Related Work
2.1 Basics on Tools Supporting the Management of Big Data
2.2 Evolution of HIS
3 Advanced Data Search
3.1 Complex Search
4 A Big Data Architecture for Supporting EHR
5 Case Study: A Nationwide System
5.1 Law Requirements
5.2 Experimental Infrastructure
6 Conclusions and Future Works
References
Integrating Open Data on Cancer in Support to Tumor Growth Analysis
1 Introduction
2 Related Work
2.1 Open Data for Scientific Research
2.2 Open Data in Cancer Research
2.3 Biological Background
3 Approach
3.1 Relevance to Tumor Growth?
4 Results
4.1 Overview of Available Data
4.2 Literature Mining
4.3 Data Processing
4.4 User Interface Extensions
5 Challenges
6 Discussion and Conclusion
References
Information Technologies in Brain Science
Filter Bank Common Spatio-Spectral Patterns for Motor Imagery Classification
1 Introduction
2 Materials and Methods
2.1 Common Spatial Patterns
2.2 Filter Bank Common Spatio - Spectral Patterns
2.3 Filter Bank Selection
2.4 Data Description and Preprocessing
2.5 Selected filters
3 Results
3.1 Evaluated Methods and Selected Configurations
3.2 Classification Results
3.3 Spatial and Spectral Filters
4 Conclusion
References
Adaptive Segmentation Optimization for Sleep Spindle Detector
1 Introduction
2 Materials and Methods
2.1 Dataset
2.2 Method Overview
2.3 Segmentation
2.4 Optimization Using Particle Swarms
2.5 Fitness Function
3 Empirical Results
3.1 Experimental Settings
3.2 Results
4 Conclusion and Discussion
References
Probabilistic Model of Neuronal Background Activity in Deep Brain Stimulation Trajectories
1 Introduction
1.1 Existing Models
1.2 Proposed Model
2 Methods
2.1 Data Collection, Annotation and Pre-processing
2.2 Electric Field of the STN
2.3 Parametric Model of STN Background Activity
2.4 Crossvalidation
3 Experimental Results
3.1 Data Summary
3.2 Classification Results and Discussion
3.3 Fitting of Individual Trajectories and Log-Likelihood Function Shape
4 Discussion and Further Work
References
Social Networks and Process Analysis in Biomedicine
Multidisciplinary Team Meetings - A Literature Based Process Analysis
1 Introduction
2 Methods
3 Results
3.1 Participants in a MDTM
3.2 Patient Participates
3.3 Information Required in Advance of a MDTM
3.4 Workflows
3.5 Identified Problems
3.6 Identified Solutions
4 Discussion
5 Conclusion and Outlook
References
A Model for Semantic Medical Image Retrieval Applied in a Medical Social Network
Abstract
1 Introduction
2 Representation of Information in a Medical Social Network
2.1 Representation of Textual Modality
2.2 Representation of Medical Image
2.3 Fusion Model
2.3.1 Latent Semantic Indexing
2.3.2 Social Medical Report' Research
3 Experimental Evaluation
3.1 Test Data and Evaluation Criteria
3.2 Results and Discussion
4 Conclusion
References
Poster Session
A Clinical Case Simulation Tool for Medical Education
Abstract
1 Introduction
2 Methods
3 Results
4 Discussion
Acknowledgements and Support
References
Covariate-Related Structure Extraction from Paired Data
1 Introduction
2 Covariate Information Related Structure Extraction from Multi-view Data
2.1 Partial Least Squares
2.2 Canonical Correlation Analysis
2.3 Data Covariate Prediction
3 Experiments and Results
4 Conclusions and Discussion
References
Semantic Annotation of Medical Documents in CDA Context
1 Motivation
2 Related Work
2.1 Extraction of Semantic Information
2.2 Clinical Document Architecture
3 Approach
3.1 Document Classification
3.2 Section Recognition
3.3 Semantic Annotation
4 Conclusion
References
Importance and Quality of Eating Related Photos in Diabetics
1 Introduction
2 Diabetes Mellitus, Carbs and Activity
3 Pilot Study
3.1 Recording Meals - Text Records
3.2 Metric Systems
3.3 Quality of Photos
4 Discussion and Conclusions
References
Univariate Analysis of Prenatal Risk Factors for Low Umbilical Cord Artery pH at Birth
1 Introduction
2 Methods
2.1 Database
2.2 Features
2.3 Statistical Evaluation
3 Results
4 Discussion
5 Conclusion
References
Applying Ant-Inspired Methods in Childbirth Asphyxia Prediction
1 Introduction
1.1 Motivation and Clinical View
2 Methodology
2.1 Approaches Used
2.2 Problem Outline
3 Dataset Overview and Basic Preview
3.1 Initial Analysis
3.2 Practical Problems
3.3 Graphical Visualization
4 Dataset Visualization
4.1 Human Organization
4.2 Automated Organization
4.3 Combined Approach
5 CTG Record Classification
6 Results and Conclusion
7 Discussion and Future Work
References
Tumor Growth Simulation Profiling
1 Introduction
2 Approach
3 Results & Discussion
4 Conclusion
References
Integrated DB for Bioinformatics: A Case Study on Analysis of Functional Effect of MiRNA SNPs in Cancer
1 Introduction
2 Related Work
3 Case Study: Analysis of Functional Effect of MiRNA Single Nucleotide Polymorphisms (SNPs) in Cancer
4 Materials and Methods
4.1 Web Resources for Solving the Proposed Case Study
4.2 BioGraphDB Framework
5 Result and Discussion
6 Conclusions
References
The Database-is-the-Service Pattern for Microservice Architectures
1 Introduction
2 Background
3 The Patterns Related to the Microservice Architectures
3.1 The API Gateway Pattern
3.2 The Discovery Patterns
3.3 The Service Registry Pattern
3.4 The Database per Service Pattern
4 The Database-is-the-Service Pattern
5 Proof of Concept
5.1 A Multi-model NoSQL DBMS as an EbXML Registry
6 Conclusions and Future Work
References
A Comparison Between Classification Algorithms for Postmenopausal Osteoporosis Prediction in Tunisian Population
Abstract
1 Introduction
2 Classification Techniques: A Review of Classification Algorithms
3 Experimental Study: Application to Osteoporosis in Tunisian Population
3.1 Description of the Data Set
3.2 Concepts and Experimental Protocol to Compare the Performances of Classification Algorithms for Osteoporosis Prediction
3.3 Concepts and Experimental Protocol to Extract the Most Important Risk Factors for Osteoporosis Occurrence
4 Discussion
4.1 Experimental Discussion of Classification Results
4.2 Experimental Discussion of Risk Factors Selection
5 Conclusion and Future Works
References
Process Mining: Towards Comparability of Healthcare Processes
1 Motivation
2 Problem
3 Approach
4 Results
5 Conclusions
References
Author Index

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Information Technology in Bio- and Medical Informatics

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