
Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2015
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The three-volume set LNCS 9349, 9350, and 9351 constitutes the refereed proceedings of the 18th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2015, held in Munich, Germany, in October 2015. Based on rigorous peer reviews, the program committee carefully selected 263 revised papers from 810 submissions for presentation in three volumes. The papers have been organized in the following topical sections: quantitative image analysis I: segmentation and measurement; computer-aided diagnosis: machine learning; computer-aided diagnosis: automation; quantitative image analysis II: classification, detection, features, and morphology; advanced MRI: diffusion, fMRI, DCE; quantitative image analysis III: motion, deformation, development and degeneration; quantitative image analysis IV: microscopy, fluorescence and histological imagery; registration: method and advanced applications; reconstruction, image formation, advanced acquisition - computational imaging; modelling and simulation for diagnosis and interventional planning; computer-assisted and image-guided interventions.
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Content
- Intro
- Preface
- Organization
- Contents - Part I
- Part I Advanced MRI: Diffusion, fMRI, DCE
- Automatic Segmentation of Renal Compartments in DCE-MRI Images
- 1 Introduction
- 2 Our 3-Step Method
- 2.1 Step 1 - Initial Segmentation Based on MSTV
- 2.2 Step 2 - PCA-kmeans Clustering for Renal Compartment Segmentation
- 2.3 Step 3 - Refinement
- 3 Experimental Results
- 4 Conclusion and Future Work
- References
- Harmonizing Diffusion MRI Data Across Multiple Sites and Scanners
- 1 Introduction
- 2 Our Contributions
- 3 Method
- 3.1 Diffusion MRI and RISH Features
- 3.2 Mapping RISH Features Between Sites
- 4 Results
- 5 Conclusion and Limitations
- References
- Track Filtering via Iterative Correction of TDI Topology
- 1 Introduction
- 2 Methods
- 3 Test Subjects and Data Preparation
- 4 Results and Discussions
- 5 Conclusion
- References
- Novel Single and Multiple Shell Uniform Sampling Schemes for Diffusion MRI Using Spherical Codes
- 1 Introduction
- 2 Methods
- 2.1 Spherical Code (SC) Formulation:Maximize the Minimal Separation Angle
- 2.2 Constrained Non-Linear Optimization (CNLO)
- 2.3 Iterative Maximum Overlap Construction (IMOC)
- 3 Experiments
- 4 Conclusion
- References
- q-Space Deep Learning for Twelve-Fold Shorter and Model-Free Diffusion MRI Scans
- 1 Introduction
- 2 Methods
- 3 Results
- 4 Discussion
- References
- A Machine Learning Based Approach to Fiber Tractography Using Classifier Voting
- 1 Introduction
- 2 Materials and Methods
- 2.1 Classifier Training
- 2.2 Streamline Propagation
- 2.3 Experiments
- 3 Results
- 4 Discussion and Conclusion
- References
- Symmetric Wiener Processes for Probabilistic Tractography and Connectivity Estimation
- 1 Introduction
- 2 Method
- 2.1 Angular Constraint and Implementation
- 3 Experiments
- 3.1 In-Vivo Human Brain
- 4 Discussion
- References
- An Iterated Complex Matrix Approach for Simulation and Analysis of Diffusion MRI Processes
- 1 Introduction
- 2 Theory and Method
- 2.1 The Short Time Limit, ?t 0
- 2.2 From Compartment Shape to Simulation Matrix
- 3 Results
- 3.1 Compartment Estimation
- 4 Conclusion and Discussion
- References
- Prediction of Motor Function in Very Preterm Infants Using Connectome Features and Local Synthetic Instances
- 1 Introduction
- 2 Methods
- 3 Results
- 4 Conclusions
- References
- Segmenting Kidney DCE-MRI Using 1st-Order Shape and 5th-Order Appearance Priors
- 1 Introduction
- 2 Shape-Appearance Guided Deformable Boundary
- 3 Experimental Validation and Conclusions
- References
- Comparison of Stochastic and Variational Solutions to ASL fMRI Data Analysis
- 1 Introduction
- 2 Joint Detection Estimation Model for fASL Data
- 3 Variational EM Estimation
- 4 Results
- 4.1 Artificial Data
- 4.2 Real Data
- 5 Conclusion
- References
- Prediction of CT Substitutes from MR Images Based on Local Sparse Correspondence Combination
- 1 Introduction
- 2 CT Prediction by LSCC
- 2.1 Basic Idea of LSCC
- 2.2 Local Dictionary Construction
- 2.3 Local Linear Representation
- 2.4 Prediction
- 3 Experimental Results
- 3.1 Performance of Using Multimodality MR Images
- 3.2 Comparison with the Relevant Methods
- 4 Conclusion
- References
- Robust Automated White Matter Pathway Reconstruction for Large Studies
- 1 Introduction
- 2 Method
- 3 Experiments
- 4 Results
- 5 Discussion and Conclusions
- References
- Exploiting the Phase in Diffusion MRI for Microstructure Recovery: Towards Axonal Tortuosity via Asymmetric Diffusion Processes
- 1 Introduction
- 2 Theory and Methods
- 2.1 Tortuous Axon Model
- 2.2 Ensemble Average Propagator for Tortuous Axons
- 2.3 Diffusion Signal and EAP Asymmetry
- 2.4 Monte-Carlo Simulation of DW-MRI in Tortuous Axons
- 3 Experiments
- 4 Discussion and Conclusion
- References
- Sparse Bayesian Inference of White Matter Fiber Orientations from Compressed Multi-resolution Diffusion MRI
- 1 Introduction
- 2 Methods
- 2.1 Dictionary Representation of High Resolution Data
- 2.2 Partial Volume Representation of Low Resolution Data
- 2.3 Bayesian Linear Un-mixing Inference
- 2.4 Priors
- 3 Experiments and Results
- 3.1 Simulated Data
- 3.2 In-Vivo MRI Data
- 4 Conclusions
- References
- Classification of MRI under the Presence of Disease Heterogeneity using Multi-Task Learning: Application to Bipolar Disorder
- 1 Introduction
- 2 Multi-Task l2,1 + l1-norm Support Vector Machine
- 2.1 Formulation
- 2.2 Solution
- 3 Results
- 3.1 Multi-Task Feature Learning on the Simulated Data
- 3.2 Multi-Task Classification on the Bipolar Disorder Data
- 4 Conclusions
- References
- Fiber Connection Pattern-Guided Structured Sparse Representation of Whole-Brain fMRI Signals for Functional Network Inference
- 1 Introduction
- 2 Materials and Methods
- 2.1 Data Acquisition and Pre-processing
- 2.2 Dictionary Learning of Whole-Brain rsfMRI Signals
- 2.3 Fiber Connection Pattern Based Cortical Parcellation for Constraint
- 2.4 Structured Sparse Representation of Whole-Brain rsfMRI Signals
- 3 Experimental Results
- 3.1 Comparison of Identified Functional Networks
- 3.2 Functional Networks Guided by Multiple Levels of Cortical Parcellation
- 3.3 Co-visualization of Other Identified Functional Networks
- 4 Discussion and Conclusion
- References
- Joint Estimation of Hemodynamic Response Function and Voxel Activation in Functional MRI Data
- 1 Introduction
- 2 Preliminaries
- 2.1 Cerebral Hemodynamic Response Function
- 2.2 Empirical Mode Decomposition
- 3 Proposed Estimation of HRF and Voxel Activation
- 3.1 Proposed HRF Estimation Method
- 3.2 Proposed Voxel Activation Detection via Subspace Modeling
- 4 Validation of the Proposed Method
- 4.1 Results on Synthetic fMRI Data
- 4.2 Results on Real fMRI Data
- 5 Conclusion
- References
- Quantifying Microstructure in Fiber Crossings with Diffusional Kurtosis
- 1 Introduction
- 2 Related Work
- 3 How Fiber Crossings Affect Diffusional Kurtosis
- 4 A Mixture of Kurtosis Models
- 4.1 A Cylindrically Symmetric Kurtosis Model
- 4.2 Strategy for Fitting the Final Mixture
- 5 Results
- 5.1 Simulated Data
- 5.2 Real Data
- 6 Conclusion
- References
- Which Manifold Should be Used for Group Comparison in Diffusion Tensor Imaging?
- 1 Introduction
- 2 Methods
- 2.1 Pre-processing
- 2.2 Multi-linear Regression
- 2.3 Statistical Test
- 3 Validation Framework
- 3.1 Synthetic Data
- 3.2 Neuromyelitis Optica Cohort
- 4 Results
- 4.1 Results on Synthetic Data
- 4.2 Results on NMO Patients
- 5 Conclusion and Discussion
- References
- Convex Non-negative Spherical Factorization of Multi-Shell Diffusion-Weighted Images
- 1 Introduction
- 2 Method
- 3 Experiments and Results
- 3.1 Monte-Carlo Simulations
- 3.2 Results on Human Brain Data
- 4 Discussion and Conclusion
- References
- Tensorial Spherical Polar Fourier Diffusion MRI with Optimal Dictionary Learning
- 1 Introduction
- 2 Tensorial Spherical Polar Fourier Imaging (TSPFI)
- 3 TSPFI with Optimal Dictionary Learning (DL-TSPFI)
- 4 Experiments
- 5 Conclusion
- References
- Diffusion Compartmentalization Using Response Function Groups with Cardinality Penalization
- 1 Introduction
- 2 Proposed Approach
- 2.1 Response Function Groups (RFGs)
- 2.2 Estimation of Volume Fractions
- 2.3 Optimization
- 3 Experimental Results
- 3.1 Data
- 3.2 Diffusion Parameters
- 3.3 Comparison Methods
- 3.4 Results
- 4 Conclusion
- References
- V-Bundles: Clustering Fiber Trajectories from Diffusion MRI in Linear Time
- 1 Introduction
- 2 Methods and Material
- 2.1 Vector Field k-Means
- 2.2 V-Bundles
- 2.3 Material
- 3 Results
- 4 Discussion and Conclusion
- References
- Assessment of Mean Apparent Propagator-Based Indices as Biomarkers of Axonal Remodeling after Stroke
- 1 Introduction
- 2 Materials and Methods
- 2.1 Analytical Model for Signal Reconstruction
- 2.2 Tract-Based Quantitative Analysis
- 2.3 Statistical Analysis
- 3 Results and Discussions
- 4 Conclusions
- References
- Integrating Multimodal Priors in Predictive Models for the Functional Characterization of Alzheimer's Disease
- 1 Introduction
- 2 Multimodal Prior Integration for Model Enhancement
- 3 Experiments
- 4 Results and Discussion
- 5 Conclusion
- References
- Simultaneous Denoising and Registration for Accurate Cardiac Diffusion Tensor Reconstruction from MRI
- 1 Introduction
- 2 Methods
- 2.1 Denoising
- 2.2 Registration-Guided (RG) Denoising
- 2.3 Simultaneous Denoising and Registration
- 3 Results
- 4 Conclusions
- References
- Iterative Subspace Screening for Rapid Sparse Estimation of Brain Tissue Microstructural Properties
- 1 Introduction
- 2 Approach
- 2.1 Problem Description
- 2.2 Iterative Subspace Screening (ISS)
- 3 Experiments
- 3.1 Data
- 3.2 Methods of Evaluation
- 3.3 Results
- 4 Conclusion
- References
- Elucidating Intravoxel Geometry in Diffusion-MRI: Asymmetric Orientation Distribution Functions (AODFs) Revealed by a Cone Model
- 1 Introduction
- 2 Method
- 2.1 Asymmetric ODFs Based on a Cone Model
- 2.2 Measuring Asymmetry
- 3 Experimental Results
- 3.1 Synthetic Bending and Crossing Fibers
- 3.2 Results on Real Diffusion MRI Data
- 3.3 Asymmetry Index Map Results
- 4 Discussion and Conclusion
- References
- Modeling Task FMRI Data via Supervised Stochastic Coordinate Coding
- 1 Introduction
- 2 Methods
- 2.1 Stochastic Coordinate Coding of FMRI Data
- 2.2 Fix Temporal Features in Stochastic Coordinate Coding
- 2.3 Constrain Spatial Maps in Stochastic Coordinate Coding
- 2.4 Group-Wise Statistical Aanlysis of Network Spatial Maps
- 3 Experimental Results
- 3.1 Detecting Task-Evoked Networks Using Supervised SCC
- 3.2 Networks Detected By Restriction of Spatial Maps
- 3.3 Automatically Learned Concurrent Networks
- 4 Conclusion
- References
- Computer Assisted and Image-Guided Interventions
- Autonomous Ultrasound-Guided Tissue Dissection
- 1 Introduction
- 2 Materials and Methods
- 2.1 Experimental Setup
- 2.2 System Architecture
- 2.3 Robust Jacobian Estimation
- 2.4 Coordinate Frame Relationships
- 2.5 Visual Servoing with Multimodal Inputs
- 2.6 Dissection Path Generation
- 3 Results
- 3.1 Jacobian Estimation
- 3.2 Tissue Dissection
- 4 Conclusion
- References
- A Compact Retinal-Surgery Telemanipulator that Uses Disposable Instruments
- 1 Introduction
- 2 System Design
- 3 Membrane-Peeling Experiments and Results
- 4 Discussion
- References
- Surgical Tool Tracking and Pose Estimation in Retinal Microsurgery
- 1 Introduction
- 2 Proposed Method
- 2.1 Regression Forest
- 2.2 Tracking
- 2.3 Pose Estimation
- 3 Experiments and Results
- 3.1 Public Dataset Evaluation
- 3.2 Appearance Dataset Evaluation
- 4 Conclusions
- References
- Direct Calibration of a Laser Ablation System in the Projective Voltage Space
- 1 Introduction
- 2 Methods
- 2.1 Tilting Mirror Calibration with the DLT
- 2.2 Calibration Errors
- 2.3 Acquiring 2D-3D Correspondences
- 2.4 Integration of the Tilting Mirror
- 3 Experiments and Results
- 4 Conclusion
- References
- Surrogate-Driven Estimation of Respiratory Motion and Layers in X-Ray Fluoroscopy
- 1 Introduction
- 2 Methods
- 2.1 Image Formation Model
- 2.2 Surrogate-Driven Motion Model
- 2.3 Motion and Layer Estimation
- 2.4 Implementation
- 3 Experiments and Results
- 3.1 Simulated Data
- 3.2 Clinical Data
- 4 Conclusion and Outlook
- References
- Robust 5DOF Transesophageal Echo Probe Tracking at Fluoroscopic Frame Rates
- 1 Introduction
- 2 Methods
- 2.1 Algorithm
- 2.2 Experiments
- 3 Results
- 4 Discussion
- 5 Conclusion
- References
- Rigid Motion Compensation in Interventional C-arm CT Using Consistency Measure on Projection Data
- 1 Introduction
- 2 Methods
- 2.1 Objective Function
- 2.2 Optimization Procedure
- 2.3 Implementation
- 3 Results
- 4 Conclusions
- References
- Hough Forests for Real-Time, Automatic Device Localization in Fluoroscopic Images: Application to TAVR
- 1 Introduction
- 2 Methods
- 2.1 Algorithm
- 2.2 Experiments
- 3 Results
- 4 Discussion
- 5 Conclusion
- References
- Hybrid Utrasound and MRI Acquisitions for High-Speed Imaging of Respiratory Organ Motion
- 1 Introduction
- 2 Materials and Methods
- 2.1 Hardware Setup and Data Acquisition
- 2.2 Algorithm - Simpler Case: Single-Plane MR Acquisition
- 2.3 Algorithm - Extension to Multiple-Plane MR Acquisition
- 3 Results and Discussion
- References
- A Portable Intra-Operative Framework Applied to Distal Radius Fracture Surgery
- 1 Introduction
- 2 Methods
- 2.1 Intra-Operative Planning
- 2.2 Intra-Operative Guidance
- 2.3 Instrument Visualization
- 3 Experiments
- 4 Discussion and Conclusions
- References
- Image Based Surgical Instrument Pose Estimation with Multi-class Labelling and Optical Flow
- 1 Introduction
- 2 Method
- 2.1 Multi-label Probabilistic Classification
- 2.2 Multi-region Segmentation with Level Sets
- 2.3 Optimization and Tracking
- 3 Results
- 3.1 Quantitative Validation
- 3.2 Qualitative Validation
- 4 Conclusion and Discussion
- References
- Adaption of 3D Models to 2D X-Ray Images during Endovascular Abdominal Aneurysm Repair
- 1 Introduction
- 2 Methods
- 2.1 Skeleton-Based As-Rigid-As-Possible Mesh Deformation
- 2.2 Control Point Selection
- 2.3 Mesh Deformation
- 3 Results and Evaluation
- 3.1 Data Description
- 3.2 Qualitative Results
- 3.3 Quantitative Results
- 4 Conclusion and Outlook
- References
- Projection-Based Phase Features for Localization of a Needle Tip in 2D Curvilinear Ultrasound
- 1 Introduction
- 2 Methods
- 2.1 Needle Tip Localization Using Projection-Based Image Phase Features
- 2.2 Data Acquisition and Experiments
- 3 Results
- 4 Discussions and Conclusions
- References
- Inertial Measurement Unit for Radiation-Free Navigated Screw Placement in Slipped Capital Femoral Epiphysis Surgery
- 1 Introduction
- 2 Methodology
- 3 Results
- 4 Conclusion and Future Work
- References
- Pictorial Structures on RGB-D Images for Human Pose Estimation in the Operating Room
- 1 Introduction
- 2 Method
- 2.1 Flexible Mixtures of Parts
- 2.2 Appearance Model
- 3 Experimental Results and Discussions
- 4 Conclusions
- References
- Interventional Photoacoustic Imaging of the Human Placenta with Ultrasonic Tracking for Minimally Invasive Fetal Surgeries
- 1 Introduction
- 2 Materials and Methods
- 2.1 PA Imaging and Ultrasonic Tracking System
- 2.2 Imaging and Tracking with a Human Placenta
- 3 Results and Discussion
- References
- Automated Segmentation of Surgical Motion for Performance Analysis and Feedback
- 1 Introduction
- 2 Method
- 3 Experiment Results
- 4 Discussion and Conclusion
- References
- Vision-Based Intraoperative Cone-Beam CT Stitching for Non-overlapping Volumes
- 1 Introduction
- 2 Materials and Methods
- 2.1 System Setup and Calibration
- 2.2 CBCT Volume and Video Acquisition
- 2.3 Two-Dimensional Feature Detection and Matching
- 2.4 Recovering Three-Dimensional Coordinates
- 2.5 Estimating 3D Transformation and CBCT Volume Stitching
- 3 Experiments and Results
- 4 Discussion and Conclusion
- References
- Visibility Map: A New Method in Evaluation Quality of Optical Colonoscopy
- 1 Introduction
- 2 Method
- 2.1 Camera Motion Estimation
- 2.2 Generating Visibility Map
- 3 Experiments and Results
- 3.1 Simulated Video
- 3.2 Extracted Visibility Map from Simulated Videos
- 3.3 Application to Actual Colonoscopy Video
- 4 Discussion and Conclusion
- References
- Tissue Surface Reconstruction Aided by Local Normal Information Using a Self-calibrated Endoscopic Structured Light System
- 1 Introduction
- 2 Methods
- 3 Experiments and Results
- 4 Discussion and Conclusion
- References
- Surgical Augmented Reality with Topological Changes
- 1 Introduction
- 2 Method
- 2.1 Coupling Real and Virtual Organs
- 2.2 Detecting Discontinuities in Motion
- 2.3 Robust Processing of the Cut
- 3 Experimental Results
- 4 Conclusion and Discussion
- References
- Towards an Efficient Computational Framework for Guiding Surgical Resection through Intra-operative Endo-microscopic Pathology
- 1 Introduction
- 2 Computational Pipeline
- 3 Experiments
- 4 Results and Discussions
- 5 Conclusion
- References
- Automated Assessment of Surgical Skills Using Frequency Analysis
- 1 Introduction
- 2 Background
- 3 Framework for Skill Assessment
- 4 Experimental Evaluation
- 5 Results and Discussion
- References
- Robust Live Tracking of Mitral Valve Annulus for Minimally-Invasive Intervention Guidance
- 1 Introduction
- 2 Methods
- 2.1 Mitral Valve Annulus Detector
- 2.2 Optical Flow Key Frame Tracker
- 3 Experiments and Results
- 3.1 Dataset
- 3.2 Quantitative Evaluation
- 4 Conclusion
- References
- Motion-Aware Mosaicing for Confocal Laser Endomicroscopy
- Introduction
- 1 Dynamic Mosaicing
- 1.1 Problem Statement and Related Work
- 1.2 Markov Random Field Formulation
- 1.3 Hierachical Optimization
- 1.4 Gradient-Domain Composition
- 1.5 Looping Mosaic
- 2 Combining Static and Dynamic Mosaics
- 2.1 Texture Preserving Static Mosaicing
- 2.2 Static Background Detection
- 2.3 Combining Still Images and Video Segments
- 3 Experiments and Results
- 3.1 Materials
- 3.2 Consistency of the Visual Summary
- 4 Discussion
- References
- A Registration Approach to Endoscopic Laser Speckle Contrast Imaging for Intrauterine Visualisation of Placental Vessels
- 1 Introduction
- 2 Methods
- 3 Experiments and Results
- 4 Discussion
- References
- Marker-Less AR in the Hybrid Room Using Equipment Detection for Camera Relocalization
- 1 Introduction
- 2 Methods
- 2.1 System Setup
- 2.2 Tracking Pipeline
- 2.3 Equipment Detection
- 3 Results
- 4 Conclusion
- References
- Hybrid Retargeting for High-Speed Targeted Optical Biopsies
- 1 Introduction
- 2 Methods
- 3 Results
- 4 Conclusion
- References
- Visual Force Feedback for Hand-Held Microsurgical Instruments
- 1 Introduction
- 2 Materials and Methods
- 2.1 System Overview
- 2.2 Visual Force-Feedback
- 2.3 Augmented Reality Integration
- 2.4 Force-Based Displacement
- 3 Experimental Setup and Results
- 3.1 Retraction Study
- 3.2 Dissection Study
- 3.3 Depth Perception Study
- 4 Discussion and Conclusion
- References
- Automated Three-Piece Digital Dental Articulation
- 1 Introduction
- 2 Algorithm for Automatic 3-Piece Dental Articulation
- 2.1 Anterior Segment Alignment
- 2.2 Right and Left Posterior Segments Alignment
- 3 Experiments and Results
- 3.1 Dental Models and Digital Dental Articulation
- 3.2 Qualitative Validation and Results
- 3.3 Quantitative Validation
- 4 Discussion and Future Work
- References
- A System for MR-Ultrasound Guidance during Robot-Assisted Laparoscopic Radical Prostatectomy
- 1 Introduction
- 2 Materials and Methods
- 2.1 TRUS Imaging System
- 2.2 TRUS-MR Registration
- 2.3 in-vivo Patient Studies and Results
- 3 Discussions and Conclusions
- References
- Computer Aided Diagnosis I: Machine Learning
- Automatic Fetal Ultrasound Standard Plane Detection Using Knowledge Transferred Recurrent Neural Networks
- 1 Introduction
- 2 Method
- 2.1 Joint Learning with Knowledge Transfer across Multi-tasks
- 2.2 US Standard Plane Detection via T-RNN
- 3 Experiments and Results
- 4 Conclusion
- References
- Automatic Localization and Identification of Vertebrae in Spine CT via a Joint Learning Model with Deep Neural Networks
- 1 Introduction
- 2 Method
- 2.1 Coarse Vertebra Candidates Localization
- 2.2 J-CNN for Vertebrae Identification
- 2.3 Localization Refinement with Shape Regression Modelling
- 3 Experiments
- 4 Discussion and Conclusion
- References
- Identification of Cerebral Small Vessel Disease Using Multiple Instance Learning
- 1 Introduction
- 2 Methods
- 3 Patch Extraction
- 4 Experiments and Results
- 4.1 Imaging Data and Pre-processing
- 4.2 Patch-Based Identification of SVD
- 5 Discussion and Conclusion
- References
- Why Does Synthesized Data Improve Multi-sequence Classification?
- 1 Introduction
- 2 Methods
- 3 Data and Implementation
- 4 Experiments
- 5 Results
- 6 Discussion and Conclusion
- References
- Label Stability in Multiple Instance Learning
- 1 Introduction
- 2 Multiple Instance Learning
- 3 Instance Stability
- 4 Experiments and Results
- 5 Conclusions
- References
- Spectral Forests: Learning of Surface Data, Application to Cortical Parcellation
- 1 Introduction
- 2 Method
- 3 Results
- 3.1 Euclidean versus Spectral Coordinates
- 3.2 Full Cortical Parcellation
- 4 Conclusion
- References
- DeepOrgan: Multi-level Deep Convolutional Networks for Automated Pancreas Segmentation
- 1 Introduction
- 2 Methods
- 2.1 Candidate Region Generation
- 2.2 Convolutional Neural Network (ConvNet) Setup
- 2.3 P-ConvNet: Deep Patch Classification
- 2.4 R-ConvNet: Deep Region Classification
- 2.5 Data Augmentation
- 2.6 Cross-Scale and 3D Probability Aggregation
- 3 Results and Discussion
- 4 Conclusion
- References
- 3D Deep Learning for Efficient and Robust Landmark Detection in Volumetric Data
- 1 Introduction
- 2 Efficient Detection with Neural Networks
- 3 Robust Detection by Combining Multiple Features
- 4 Experiments
- 5 Conclusions
- References
- A Hybrid of Deep Network and Hidden Markov Model for MCI Identification with Resting-State fMRI
- 1 Introduction
- 2 Materials and Preprocessing
- 3 Proposed Method
- 3.1 Deep Auto-Encoder
- 3.2 Hidden Markov Models
- 4 Experiments and Discussion
- 4.1 Experimental Settings
- 4.2 Performance Comparison
- 5 Conclusion
- References
- Combining Unsupervised Feature Learning and Riesz Wavelets for Histopathology Image Representation: Application to Identifying Anaplastic Medulloblastoma
- 1 Introduction
- 2 Methodological Description
- 2.1 Topographic Independent Component Analysis
- 2.2 Image Representation via Rotation-Covariant Riesz Wavelets
- 2.3 Fusing UFL and Riesz Features
- 3 Experimental Results and Discussion
- 3.1 Medulloblastoma Dataset
- 3.2 Experimental Setup
- 3.3 Results
- 4 Concluding Remarks
- References
- Automatic Coronary Calcium Scoring in Cardiac CT Angiography Using Convolutional Neural Networks
- 1 Introduction
- 2 Material and Methods
- 2.1 Data
- 2.2 Automatic CAC Scoring
- 3 Experiments and Results
- 4 Discussion and Conclusion
- References
- A Random Riemannian Metric for Probabilistic Shortest-Path Tractography
- 1 Introduction
- 2 Shortest-Path Tractography and Random Geometries
- 3 Regressing an ODE
- 4 Experimental Results
- 5 Discussion and Conclusion
- References
- Deep Learning and Structured Prediction for the Segmentation of Mass in Mammograms
- 1 Introduction
- 2 Methodology
- 2.1 Conditional Random Field (CRF)
- 2.2 Structured Support Vector Machine (SSVM)
- 2.3 Potential Functions
- 3 Experiments
- 3.1 Materials and Methods
- 3.2 Results
- 4 Discussion and Conclusions
- References
- Learning Tensor-Based Features for Whole-Brain fMRI Classification
- 1 Introduction
- 2 Methods
- 3 Experiments and Discussions
- 4 Conclusion
- References
- Prediction of Trabecular Bone Anisotropy from Quantitative Computed Tomography Using Supervised Learning and a Novel Morphometric Feature Descriptor
- 1 Introduction
- 2 Methods
- 2.1 Feature Extraction
- 2.2 Multi-output Regression Model
- 3 Results and Discussion
- 3.1 Datasource
- 3.2 Evaluation Metric
- 3.3 Experiment
- 4 Conclusion and Future Work
- References
- Automatic Diagnosis of Ovarian Carcinomas via Sparse Multiresolution Tissue Representation
- 1 Introduction
- 2 Approach
- 3 Experiments and Discussion
- 4 Conclusion
- References
- Scale-Adaptive Forest Training via an Efficient Feature Sampling Scheme
- 1 Introduction
- 2 Methods
- 2.1 Haar-Like Features for Segmentation
- 2.2 Classification Forests
- 2.3 Fine-to-Coarse Sequential Feature Sampling
- 3 Experiments
- 4 Conclusion
- References
- Multiple Instance Cancer Detection by Boosting Regularised Trees
- 1 Introduction
- 2 Related Work
- 3 Method
- 3.1 Notation
- 3.2 Discriminative Prototypes
- 3.3 Boosting with Regularised Regression Trees
- 4 Evaluations
- 4.1 Breast Cancer TMA Images
- 4.2 OPT Images of Colorectal Polyps
- 5 Conclusions
- References
- Uncertainty-Driven Forest Predictors for Vertebra Localization and Segmentation
- 1 Introduction
- 2 Method
- 3 Experiments
- 4 Results and Discussion
- 5 Conclusion
- References
- Who Is Talking to Whom: Synaptic Partner Detection in Anisotropic Volumes of Insect Brain
- 1 Introduction
- 2 Methods
- 2.1 Unary Factors
- 2.2 Pairwise Factors
- 3 Results
- 4 Discussion
- References
- Direct and Simultaneous Four-Chamber Volume Estimation by Multi-Output Regression
- 1 Introduction
- 2 Cardiac Four-Chamber Volume Estimation via Multi-Output Regression
- 2.1 Cardiac Image Representations
- 2.2 Multi-Output Regression with Random Forests
- 3 Experiments
- 3.1 Dataset and Implementation Details
- 3.2 Simultaneous Four-Chamber Volume Estimation
- 4 Conclusion
- References
- Cross-Domain Synthesis of Medical Images Using Efficient Location-Sensitive Deep Network
- 1 Introduction
- 2 Location-Sensitive Deep Network
- 2.1 Training LSDN
- 3 Network Simplification
- 4 Experiments
- 5 Conclusions
- References
- Grouping Total Variation and Sparsity: Statistical Learning with Segmenting Penalties
- 1 Introduction
- 2 Sparse Variation: A New Spatially Regularizing Penalty
- 2.1 Penalized Regression: Problem Formulation and Prior Art
- 2.2 A New Penalty for Segmentation Purposes: Sparse Variation
- 2.3 Optimization Strategy
- 3 Empirical Results
- 3.1 A Simple 1D Signal Recovery Problem
- 3.2 Segmenting Regions from MRI Data
- 3.3 Optimization Speed of FASTAA
- References
- Scandent Tree: A Random Forest Learning Method for Incomplete Multimodal Datasets
- 1 Introduction
- 2 Method
- 3 Results and Discussion
- 4 Conclusion
- References
- Disentangling Disease Heterogeneity with Max-Margin Multiple Hyperplane Classifier
- 1 Introduction
- 2 Method
- 2.1 Margin for Multiple Hyperplanes - Polytope
- 3 Experimental Validation
- 4 Conclusion
- References
- Marginal Space Deep Learning: Efficient Architecture for Detection in Volumetric Image Data
- 1 Introduction
- 2 Related Work
- 3 Method
- 3.1 Sparse Deep Learning Architectures
- 3.2 Marginal Space Deep Learning
- 4 Experimental Results
- 5 Conclusion
- References
- Nonlinear Regression on Riemannian Manifolds and Its Applications to Neuro-Image Analysis
- 1 Introduction
- 2 Methodology
- 2.1 Manifold Valued Independent Variable
- 2.2 Manifold Valued Dependent Variable
- 3 Experimental Results
- 3.1 Manifold Valued Independent Variable
- 3.2 Manifold Valued Dependent Variable
- 4 Conclusions
- References
- Author Index
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