
Functional Imaging and Modeling of the Heart
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Content
- Title
- Preface
- Organization
- Table of Contents
- Oral Session 1: Cardiac Electrophysiology
- Anode Make and Break Excitation Mechanisms and Strength-Interval Curves: Bidomain Simulations in 3D Rotational Anisotropy
- Introduction
- Methods
- Results
- Discussion
- References
- Comparing Simulated Electrocardiograms of Different Stages of Acute Cardiac Ischemia
- Motivation
- Methods and Materials
- Modeling Ischemic Myocytes
- Modeling Heterogeneous Excitation Propagation
- Calculation of Body Surface Electrocardiograms
- Results
- Cell Simulations
- Tissue Simulations
- Discussion and Conclusions
- References
- Interpreting Optical Mapping Recordings in the Ischemic Heart: A Combined Experimental and Computational Investigation
- Introduction
- Methods
- Optical Mapping Experiments
- Modeling Ischemia-Induced Alterations in Electrophysiology
- Optical Mapping Model
- Data Analysis
- Results
- Optical Mapping Experiments
- Border Zone Effects on Epicardial Transmembrane Potential
- Optical Signal and Transmembrane Potential Comparison
- Varying Optical Mapping Penetration Depth
- Conclusions
- References
- Towards High Resolution Computational Models of the Cardiac Conduction System: A Pipeline for Characterization of Purkinje-Ventricular-Junctions
- Introduction
- Material and Methods
- Tissue Preparation
- Image Acquisition
- Geometric Reconstruction and Structural Analysis
- Results
- Discussion and Conclusions
- References
- Poster Session 1: Cardiac Electrophysiology
- Dynamic Classification of Cellular Transmural TransMembrane Potential (TMP) Activity of the Heart
- Introduction
- Methods
- Co-clustering within a Cardiac Electrophysiology Context
- Bipartite Spectral Graph Co-clustering Algorithm
- Experimental Results
- Simulated Data Sets
- Results
- Quantitative Analysis
- Discussion and Conclusion
- References
- Cardiac Deformation from Electro-Anatomical Mapping Data: Application to Scar Characterization
- Introduction
- Cardiac Deformation Estimation
- Data Pre-processing
- Deformation Estimation
- Statistical Analysis
- Clinical Data
- Results
- Discussion
- Conclusions
- References
- Comparing Image-Based Respiratory Motion Correction Methods for Anatomical Roadmap Guided Cardiac Electrophysiology Procedures
- Introduction
- Method
- Diaphragm or Heart Border Tracking
- Tracheal Bifurcation Detection
- CS Catheter Detection
- Results
- Diaphragm and Heart Border Tracking Errors
- Tracheal Bifurcation Detection Errors
- Validation Using the Lasso Catheter
- Conclusion and Discussions
- References
- Automatic Segmentation of Left Atrial Scar from Delayed-Enhancement Magnetic Resonance Imaging
- Introduction
- Methods
- Patient Protocol
- Left Atrium Segmentation and Image Registration
- Segmentation of Atrial Lesions
- Evaluation of Novel Approach
- Results
- Discussion and Conclusion
- References
- Estimation of Activation Times in Cardiac Tissue Using Graph Based Methods
- Introduction
- Methods
- The Bidomain Model
- The Graph Based Model
- Results
- Method Comparison for Different Mesh Resolutions
- Method Comparison in a Slab of Heterogeneous, Anisotropic Tissue
- Method Comparison in a Rabbit Ventricular Mesh
- Conclusions
- References
- Automatic Segmentation of Cardiac CTs - Personalized Atrial Models Augmented with Electrophysiological Structures
- Introduction
- Materials and Methods
- Wall Thickness from MR-Data
- Atlas Mesh Generation
- Model Based Segmentation of the Atrial Endocardium
- Registration of the Atlas Mesh with Patient Images
- Results
- Discussion and Conclusion
- References
- Image Analysis
- Construction of Left Ventricle 3D Shape Atlas from Cardiac MRI
- Introduction
- Methods
- Algorithm Framework
- Geometry Processing
- Shape Registration and Shape Statistics
- Experiments
- Conclusions
- References
- Simulation of Diffusion Anisotropy in DTI for Virtual Cardiac Fiber Structure
- Introduction
- Method
- VCFS Model
- Diffusion MRI Simulation Theory
- Results and Discussion
- Monte Carlo Simulation of the Restricted Diffusion
- Simulation of VCFS
- DTI Simulation and Anisotropy Analysis
- Conclusion
- References
- On the Estimation of Transmural Myocardial Shear by Means of MRI Tagging
- Introduction
- Materials and Methods
- MRIT Acquisitions and Bandpass Filtering
- LV Motion Tracking with SinMod
- Lagrangian Shear Strain in Synthetic and Acquired Images
- Rotation and Shear Estimated with 16 Markers
- Results
- Discussion and Conclusion
- References
- Multi-frame Radial Basis Functions to Combine Shape and Speckle Tracking for Cardiac Deformation Analysis in Echocardiography
- Introduction
- Methods
- Shape Tracking Methods
- Speckle Tracking Methods
- Combined Method with RBFs
- Results
- Conclusion
- References
- Functional Imaging and Modeling
- Monitoring Treatment Outcome: A Visualization Prototype for Left Ventricular Transformation
- Introduction
- Computation of Left Ventricular Transformation
- Clinical Example
- Discussion
- References
- An Ultrasound-Driven Kinematic Model of the Heart That Enforces Local Incompressibility
- Introduction
- Methods
- Model Formulation
- Mouse Heart Imaging and Motion Estimates
- Optimization of Model Parameters
- Results
- Conclusion
- References
- Driving Dynamic Cardiac Model Adaptation with MR-Tagging Displacement Information
- Introduction
- Dynamic DET Model
- Model Main Equations
- Algorithm Implementation
- A Priori Information Applied to the Model
- Payne's Method for Prescribed Displacement
- MR-Tagging Data
- Method Evaluation Protocol
- Simulated MR-Tagging Sequences
- Study of Motion Prescription onto the Model
- The Case of Noisy Motion Data
- Global vs. Local Absence of Data
- In Vivo Data
- Discussion
- Conclusion
- References
- Towards Patient Specific Catheter Selection: Computation of Aortic Geometry Based on Fused MRI Data
- Introduction
- Material and Methods
- Whole Aorta Segmentation
- Coronary Artery Ostia Segmentation
- Geometrical Parameter Estimation
- Results
- Discussion and Conclusion
- References
- Oral Session 2: Image Analysis
- 4D Cardiac Reconstruction Using High Resolution CT Images
- Introduction
- Methodology
- Model Initialization
- Deformable Model Based Segmentation
- Interpolation
- Results and Validation
- Conclusion
- References
- 3D Fusion Echocardiography Improves Transoeosphageal LV Assessment
- Automatic Segmentation of Different Pathologies from Cardiac Cine MRI Using Registration and Multiple Component EM Estimation
- Introduction
- Methods
- Initial Atlas-Based Segmentation of the Heart
- Multi-component EM Estimation
- Segmentation of the Epi- and Endocardial Surfaces
- Results
- Discussion and Conclusion
- References
- Statistical Analysis of the Human Cardiac Fiber Architecture from DT-MRI
- Introduction
- Materials and Method
- Data Acquisition
- Segmentation
- Registration and Atlas Construction
- Statistical Analysis
- Results
- Fiber Variability
- Variability across Myocardial Segments
- Conclusion
- References
- Morphological Classification: Application to Cardiac MRI of Tetralogy of Fallot
- Introduction
- Method
- Feature Extraction
- Dimensionality Reduction
- Non-linear SVM
- Experiment
- Features
- Classification Accuracy
- Group Comparisons via Voxel-Based Analysis
- Conclusion
- References
- Oral Session 3: Functional Imaging and Modeling
- Cardiac MRI Intervention and Diagnosis via Deformable Collaborative Tracking
- Introduction
- Methodology
- Collaborative Tracking
- Deformed Region Computation
- Experimentation
- Collaborative versus MIL Tracking in Interventional MRI
- Surface Area Computation
- Conclusion
- References
- A 3D MRI-Based Cardiac Computer Model to Study Arrhythmia and Its In-vivo Experimental Validation
- Introduction
- Methodology
- Electrophysiology Study
- Construction of the 3D MRI-Based Computer Model of the Heart
- Mathematical Model
- Results
- Assessment of VT Inducibility in the EP Study
- Assessment of VT Inducibility in the 3D MR Image-Based Model
- Discussion and Future Work
- References
- An Automated Segmentation and Classification Framework for CT-Based Myocardial Perfusion Imaging for Detecting Myocardial Perfusion Defect
- Introduction
- Methodology
- CT Perfusion Imaging Protocol
- LV Segmentation in 3D
- Segmental Intensity Profile
- Ischemia Classification Using Linear Discriminant Analysis
- Experiments and Results
- Myocardial Segmentation
- Visual and Quantitative Assessment of CT Perfusion Image
- Discussion and Conclusion
- References
- Modeling Mitral Valve Leaflets from Three-Dimensional Ultrasound
- Introduction
- Methods and Materials
- Algorithm Summary and Components
- Constructing the Search Space
- Estimating an Extended Leaflet Surface
- Trimming an Extended Leaflet Surface
- Redefining the Search Space Axis
- Refining an Extended Leaflet Surface
- Mesh Generation
- Performance and Validation
- Discussion
- References
- Modeling Atrial Fiber Orientation in Patient-Specific Geometries: A Semi-automatic Rule-Based Approach
- Introduction
- Methods
- Patient-Specific Atrial Models
- Tissue Classification and Fiber Generation
- Electrophysiological Simulations
- Results
- Fiber Orientation and Tissue Classification
- Influence of Atrial Anisotropy on Excitation Sequence
- Discussion and Conclusion
- References
- Anisotropic Mass-Spring Method Accurately Simulates Mitral Valve Closure from Image-Based Models
- Introduction
- Methods
- Results
- Discussion
- Conclusion
- References
- Poster Session 2
- In Silico Analysis of the Impact of Transmural Myocardial Infarction on Cardiac Mechanical Dynamics for the 17 AHA Segments
- Introduction
- Methods
- Electrophysiological Modeling
- Elastomechanical Modeling
- Modeling of Transmural Infarctions in 17 AHA Segments
- Results
- Discussion and Future Work
- References
- Automatic Delineation of Left and Right Ventricles in Cardiac MRI Sequences Using a Joint Ventricular Model
- Introduction
- Methodology
- Joint Anatomy Model
- Learning-Based Model Fitting
- Dynamics Extraction
- Experiments
- Conclusions
- References
- Simulating Drug-Induced Effects on the Heart: From Ion Channel to Body Surface Electrocardiogram
- Introduction
- Methods
- 3D Anatomical Model of the Human Body
- Electrical Model
- Dofetilide Model
- Numerical Implementation
- Results
- Conclusions
- References
- Slice-Based Combination of Rest and Dobutamine-Stress Cardiac MRI Using a Statistical Motion Model to Identify Myocardial Infarction: Validation against Contrast-Enhanced MRI
- Introduction
- Methodology
- Experimental Results
- Discussion
- References
- Shape Analysis of the Left Ventricular Endocardial Surface and Its Application in Detecting Coronary Artery Disease
- Introduction
- MDCT Image Segmentation and Ventricular Shape Analysis
- Left Ventricle Segmentation and Meshing
- Shape Description
- Data Preparation
- Experimental Results
- Segmentation Results
- Shape Description Results
- Classification Accuracy
- Disccussion and Conclusions
- References
- Recovering Endocardial Walls from 3D TEE
- Introduction
- 3D Level Sets
- Inhibition Function
- Experiments
- Conclusions
- References
- Regionally Optimised Mathematical Models of Cardiac Myocyte Orientation in Rat Hearts
- Introduction
- Aims and Contributions
- Methods
- Sample Preparation and Image Aquisition
- Segmentation
- Separation of Left and Right Ventricles
- Regional Analysis
- Extended Mathematical Model
- Estimation of Optimal Parameters for the Mathematical Method
- Results
- Discussion
- References
- Mapping Contact Force during Catheter Ablation for the Treatment of Atrial Fibrillation: New Insights into Ablation Therapy
- Trials on Tissue Contractility Estimation from Cardiac Cine MRI Using a Biomechanical Heart Model
- Introduction
- Experimental Data and Direct Modeling
- Experimental Data
- Anatomical Model
- Biophysical Model
- Regional Contractility Estimation Using Data Assimilation
- Data Assimilation Methodology
- Estimation Using Segmented Cine MRI
- Estimation Results
- Discussion
- Conclusion and Perspectives
- References
- Real-Time Cardiac MR Anatomy and Dyssynchrony Overlay for Guidance of Cardiac Resynchronization Therapy Procedures: Clinical Results Update
- Parameter Identification in Cardiac Electrophysiology Using Proper Orthogonal Decomposition Method
- Introduction
- Methods
- Resolution of the Direct Problem
- Optimization Method
- POD Reduced-Order Modelling
- Results
- Two Illustrative Examples of POD Simulations
- Identification of Two Ionic Parameters
- Identification of the Initial Stimulation
- Discussion and Conclusion
- References
- Are Robotic-Assisted Catheter Ablation Lesions Different from Standard Catheter Ablation in Paroxysmal AF Patients? : Novel CMRI Findings Made Possible with Semi-automatic 3-D Visualisation
- MagnetoHemoDynamics Effect on Electrocardiograms
- Introduction
- Method
- Results
- Discussion and Conclusion
- References
- A Hybrid Method for Automatic Anatomical Variant Detection and Segmentation
- Introduction
- Method
- A Three Step Procedure
- Generation of the Model Data Base
- Detection of the Anatomical Variation
- Results
- Conclusion
- References
- Patient-Specific Model of Left Heart Anatomy, Dynamics and Hemodynamics from 4D TEE: A First Validation Study
- Introduction
- Patient-Specific Anatomy and Dynamics Computation
- Patient-Specific Hemodynamics Computation
- Validation Methodology
- Results
- Conclusion
- References
- Oral Session 4: Image Analysis
- Cardiac Motion Estimation from 3D Echocardiography with Spatiotemporal Regularization
- Introduction
- Method
- Deformation Model
- Similarity Metric
- Spatiotemporal Regularization
- Optimization
- Deformation Analysis
- Implementation
- Data and Experiment
- Result and Discussion
- Conclusion
- References
- Order Statistic Based Cardiac Boundary Detection in 3D+t Echocardiograms
- Introduction
- The Order Statistic Based Boundary Detector
- Segmentation of 3D+t Echocardiographic Images
- Results
- Conclusion
- References
- A Framework Combining Multi-sequence MRI for Fully Automated Quantitative Analysis of Cardiac Global And Regional Functions
- Introduction
- Method
- Motion and Shift Correction
- Multiple Image Registration for Segmentation Propagation
- Serial Registration for Cardiac Motion Tracking
- Cardiac Functional Analysis
- Experiment
- Conclusion
- References
- Multiview Diffeomorphic Registration for Motion and Strain Estimation from 3D Ultrasound Sequences
- Introduction
- Methods
- Experiments
- Strain Accuracy on Simulated US Data
- Strain Quantification in Healthy Volunteers
- Conclusions and Future Work
- References
- Pyramid Histograms of Motion Context with Application to Angiogram Video Classification
- Introduction
- Pre-processing of the Angiogram Sequence
- Representing Shape and Motion in Angiography Frames
- Motion Feature Representation
- Capturing Local Motion with ``motion context
- Combining Shape and Motion
- Experimental Results
- Summary
- References
- Oral Session 5: Cardiac Mechanics, Cardiac Electrophysiology
- An Automatic Data Assimilation Framework for Patient-Specific Myocardial Mechanical Parameter Estimation
- Introduction
- Material and Methods
- Clinical Measurements
- Myocardial Motion Tracking
- Dynamic Mesh Personalization
- Mechanical Simulation
- Identification of Myocardial Passive Constitutive Parameters
- Results
- Dynamic Meshing
- Mechanical Property Estimation
- Discussion
- References
- Left-Ventricular Shape Determines Intramyocardial Stroke Work Distribution
- Introduction
- Methods
- Variation in Left-Ventricular Shape
- Mechanics of the Myocardial Wall
- Depolarization Propagation
- Numerical Implementation
- Simulations
- Results
- Discussion
- Physiological Implications
- Limitations
- Conclusion
- References
- Constitutive Parameter Estimation Methodology Using Tagged-MRI Data
- Introduction
- Data Assimilation Principles
- Model
- Information Extraction from the Measurements
- Tagged-MRI Data Assimilation
- Definition of the Observation Operator
- Filter Formulation
- Parameter Estimation
- Estimation Results with Synthetic Data
- Reference Model Based on Experimental Data
- Generation of Synthetic Tags from the Model
- Estimation Results
- Concluding Remarks
- References
- Sensitivity Analysis of Mesh Warping and Subsampling Strategies for Generating Large Scale Electrophysiological Simulation Data
- Introduction
- Methods
- Experiments and Results
- Data
- Volumetric Mesh Differences
- Simulation Result Differences
- Discussion and Conclusions
- References
- Effect of Scar Development on Fast Electrophysiological Models of the Human Heart: In-Silico Study on Atlas-Based Virtual Populations
- Introduction
- Methods
- Modeling Infarction
- Modeling Fast Cardiac Conduction System of Purkinje
- Electrophysiological Models
- Virtual and Real Populations
- Results and Discussions
- Conclusions
- References
- Author Index
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