
The Dictionary of Genomics, Transcriptomics and Proteomics
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Reviews / Votes
"...this book should be available within hand's reach for everyone who is enthusiastically involved with molecular biology and gene technology."Angewandte Chemie
"This book is much more than what its concise title implies - it is more than a mere dictionary, in the sense of a collection of terms and acronyms, but rather a self-sufficient research tool, an illuminating read, and in fact an entire encyclopedia for the post-genomic era." Trends in Molecular Medicine
" This precious piece cannot be missed in any library or laboratory, nor on any desk!" BioTec
"Physically the book is beautifully presented on high quality paper and one aspect that I particulary like is the plethora of illustrations. ... this book would make a useful addition to any academic library."
School of Biosciences, Univ. of Birmingham, ISSX newsletter
"...essential for students, faculty, and researchers in genetics, biochemistry, biotechnology, and microbiology..."
CHOICE
"In summary, this is a useful resource that many institutions, academic departments, and laboratories may consider having on their reference shelves."
Clinical Chemistry
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Person
-Sequencing and analysis of fungal, plant and animal genomes
-Transcriptome analysis in pro- and eukaryotic organisms
-Technology development
Günter Kahl is the author of more than 250 scientific journal publications and several book publications including all titles of the successful book series Molecular Plant Biology Handbook series, and currently holds the CSO position at GenXPro GmbH, a company specializing in novel technologies in genomics and transcriptomics, located at the Frankfurt Innovation Centre for Biotechnology (FIZ), Frankfurt am Main, Germany.
Content
Greek Alphabet and Roman Numerals
Abbreviations and Symbols
Acronyms
A to Z Alphabetical Listing of Entries
Units and Conversion Factors
Restriction Endonucleases
Databases
Journals
Acknowledgements
Abbreviations and Symbols
a - atto (10-18) A - adenine or adenosine, absorbance Å - Ångstrom unit (1 Å = 0.1 nm) ~ - approximately ? - approximately equals A/D - analog-to-digital aa - amino acid Ab - antibody Ag - antigen AGO - argonaute protein AMP - adenosine monophosphate Ap - ampicillin ATP - adenosine triphosphate B - any nucleobase (A,C,G,or T) BAC - bacterial artificial chromosome BD - bromodomain bHLH - basic helix-loop-helix Bis - N, N´-methylenebisacrylamide BLAST - basic local alignment search tool bp - base pair(s) Bq - Becquerel BSA - bovine serum albumin bZIP - basic leucine zipper c - centi (10-2) C - cytosine or cytidine 14C - radioactive carbon °C - centigrade (degrees Celsius) Ca - Calcium CBB - Coomassie Brilliant Blue CBP - CREB-binding protein coactivator CCD - charge-coupled device Cdk - cyclin-dependent kinase cDNA - complementary DNA CE - capillary electrophoresis CGE - capillary gel electrophoresis ChIP - chromatin immunoprecipitation ChIP-seq - ChIP sequencing Ci - Curie cm - centimeter(s) Cm - chloramphenicol CO2 - carbon dioxide cpm - counts per minute CPSF - cleavage-polyadenylation specificity factor CREB - cAMP-responsive element binding protein CstF - cleavage-stimulating factor Ct - cycle of threshold CTAB - cetyltrimethylammonium bromide CTD - carboxy-terminal domain CTM - carboxyl-terminal motif Cy - cyanine d - deci (10-1) da - deca (101) D, Da - Dalton DAF - DNA amplification fingerprinting dATP - deoxyadenosine triphosphate DBD - DNA binding domain dCTP - deoxycytosine triphosphate DCL - Dicer-like ddNTP - 2´, 3´-dideoxynucleotide triphosphate DGGE - denaturing gradient gel electrophoresis dGTP - deoxyguanosine triphosphate DHS - DNase I hypersensitive site DMF - N, N´-dimethylformamide DMSO - dimethyl sulfoxide DMT, DMTr - dimethyloxytrityl DNA - deoxyribonucleic acid DNase - deoxyribonuclease DNMT - DNA cytosine methyltransferase dNTP - deoxynucleotide triphosphate DPE - downstream promoter element ds - double-stranded dsRNA - double-stranded RNA dT - deoxythymidine DTT - dithiothreitol, Cleland's reagent dTTP - deoxythymidine triphosphate dUTP - deoxyuridine triphosphate E - exa (1018) EC - enzyme classification number ECL - enhanced chemiluminescence E. coli -Escherichia coli EDTA - ethylenediaminetetraacetic acid EGTA - ethylene glycol-bis (ß-aminoethylether) N,N,N´,N´-tetraacetic acid e.g. - for example EJC - exon-junction complex ELISA - enzyme-linked immunosorbent assay emPCR - emulsion PCR EMS - ethyl methanesulfonate ENCODE - ENCyclopedia Of DNA Elements ESE - exon-splicing enhancer ESI - electrospray ionization ESI-MS - electrospray ionization mass spectrometry EST - expressed sequence tag EtBr - ethidium bromide EtOH - ethanol f - femto (10-15) Fab - antigen-binding region of an antibody FACS - fluorescence-activated cell sorter FIGE - field inversion get electrophoresis FITC - fluorescein isothiocyanate fmol - femto mol FoxA1 - forkhead box A1 FRAP - fluorescence recovery after photobleaching 5´ - carbon atom 5 of deoxyribose g - gram(s) or gravity G - guanine or guanidine, giga (109) Gb - gigabase GC - gas chromatography GFP - green fluorescent protein Gm - gentamycin GMO - genetically modified organism GO - Gene Ontology GTF - general transcription factor > - greater than h - hour(s) HAC - human artificial chromosome HAT - histone acetyltransferase 3H - tritium, radioactive hydrogen HCl - hydrochloric acid HDAC - histone deacetylase HeLa S3 cells - Helen Lane (human epithelial carcinoma) S3 cell line HEPES - N-(2-hydroxyethyl) piperazine-N´-(2-ethanesulfonic acid) HGP - human genome...
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