
Biomedical Engineering Systems and Technologies
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Content
- Intro
- Title
- Preface
- Organization
- Table of Contents
- Invited Speaker
- Informatics-Driven Infectious Disease Research
- Introduction
- Bioinformatics Needs of Infectious Disease Researchers
- Bioinformatics-Related Technologies in Infectious Disease Research
- Biology-Centric Technologies
- Computational Technologies
- Breaking Down Barriers and Integrating Full Spectrum of Analysis and Data
- References
- PART I Biomedical Electronics and Devices
- A Simple and Low Cost Device for Automatically Supervising Urine Output of Critical Patients
- Introduction
- Related Work
- The Device
- General Operating Principles
- Our Prototype
- Device Calibration
- Therapeutic Goals Supervision
- Discussion
- Conclusions and Future Work
- References
- Photoplethysmogram Processing Using an Adaptive Single Frequency Phase Vocoder Algorithm
- Introduction
- Related Work
- Algorithm Development
- Algorithm Description
- Algorithm Validation
- Results
- Discussion
- Overall Accuracy
- Robustness to Artifacts
- Computational Costs
- Conclusions
- References
- A Configurable Integrated Circuit for Biomedical Signal Acquisition
- Introduction
- System Overview
- Analog Front-End
- Instrumentation Amplifier with CMRR-Calibration
- Postamplifier and External Highpass Filter
- Low-Pass Filter and Symmetry Stage
- ADC
- Digital System Control and Interface
- DC-Suppression Feedback Circuit
- Serial Configuration Port
- High Speed Serial Dataport
- Results
- Analog Channel and CMRR Calibration
- ADC and Digital IO
- Experimental USB-Stick Application
- Summary and Conclusions
- References
- Movement Disorder Assessment and Attenuation Techniques for Removal of Tremor
- Introduction
- Movement Disorder Assessment
- Movement Disorder Attenuation
- Types of Disorders Evaluated
- Importance of Kalman Filter
- Mathematical Methods
- Kalman Filter and Smoother
- Application of the WFLC Algorithm
- Wavelet Spectral Analysis
- Experimental Methods and Results
- Data Collection
- Kalman Smoothing and WFLC
- Wavelet Spectral Analysis
- Determining Tremor Phase Shifts for Different Degrees-of-Freedom
- Summary and Conclusions
- References
- A New Approach for Diagnostic Investigation of Total Hip Replacement Loosening
- Introduction
- Methods
- Principle of the Loosening Sensor
- In Vitro Measurements Using a Total Hip Stem
- Results
- Discussion
- Conclusions
- References
- Wearable Monitoring Unit for Swimming Performance Analysis
- Introduction
- BIOSWIM Project
- Archictecture Overview
- WIMU
- Design Overview
- WIMU Architecture
- Experimental Results
- Conclusions
- References
- PART II Bioinformatics Models, Methods and Algorithms
- 3D Protein Surface Segmentation through Mathematical Morphology
- Introduction
- Looking for Pockets and Tunnels
- Pockets Refinement
- Looking for Protuberances
- Experiments and Comparisons
- Conclusions
- References
- Simple Tool for Semi-automated Evaluation of Yeast Colony Images
- Introduction
- Characteristics of Typical Images
- System Description
- Image Preprocessing
- Colony Counting
- Counting Tool
- Experiments and Results
- Algorithm Settings
- Typical Detection Errors
- Counting Performance
- Conclusions
- References
- Reconstructing Gapless Ancestral Metabolic Networks
- Introduction
- Methods
- Gapless Minimum Mutation Problem
- Local Adjustment Algorithm
- Experiments
- Random Phylogenies
- Fungal Phylogenies
- Conclusions
- References
- Discretized Kinetic Models for Abductive Reasoning in Systems Biology
- Introduction
- Discretization of Time Series from Experiments
- Modeling of the Pathways of E.Coli
- Ranking Hypotheses
- Discussion
- Enhancing the Knowledge Base
- A Finer Discretization
- Conclusions
- References
- Quasi-Steady State Approximations and Multistability in the Double Phosphorylation-Dephosphorylation Cycle
- Introduction: Michaelis-Menten Kinetics and Quasi Steady-State Approximation
- The Covalent Modification Cycle
- The Equations
- Numerical Simulations and Figures
- Conclusions
- References
- Improving Latent Semantic Analysis of Biomedical Literature Integrating UMLS Metathesaurus and Biomedical Pathways Databases
- Introduction
- Background
- Trusted Information Sources
- Integration of Trusted Information in the LSI Algorithm
- Methodology
- The Document Abstract Analysis Phase
- The Semantic Analysis and Trusted Info Integration Phase
- The Results Presentation Phase
- Experimental Results
- Conclusions
- References
- PART III Bio-inspired Systems and Signal Processing
- Towards a Patient-Specific Model of Lung Volume Using Absolute Electrical Impedance Tomography (aEIT)
- Introduction
- Study Protocol
- Subjects
- Equipments and Tools
- Spirometry and EIT Measurements
- Data-Driven Modelling Using ANFIS
- Results and Discussions
- AEIT Models Training and Testing Results
- EITSPIRO Models Training and Testing Results
- 'Generic' Modelling of EITSPIRO
- General EITSPIRO Model Training and Testing Results
- Conclusions and Future Work
- References
- Auditory Processing Inspired Robust Feature Enhancement for Speech Recognition
- Introduction
- Feature Description
- Gammatone Filter Bank
- Modulation Spectrum
- Methodology
- Experiments and Results
- Convolutive Noise
- Additive Noise
- CHiME Challenge
- Discussion
- Conclusions
- References
- A Robust and Efficient Spatio-Temporal Feature Selection for Interpretation of EEG Single Trials
- Introduction
- Materials and Methods
- Experiment Setup
- EEG Data Acquisition
- EEG Analysis
- Brain State Modeling
- Model Estimation
- Regularized Logistic Regression
- Feature Selection
- Results
- Spatio-Temporal Analysis
- Comparison with Existing Methods
- The Impact of Regularization
- Conclusions
- References
- Time Series Clustering Algorithm for Two-Modes Cyclic Biosignals
- Introduction
- Methods
- Acquisition System and Sensors
- Data Acquisition and Data Format
- Signal Processing
- Automatic Meanwave
- Results and Discussion
- Conclusions
- Future Work
- References
- Non-contact Pulse Wave Velocity Assessment Using Optical Methods
- Introduction
- Technologies
- Test Setup
- Signal Processing
- Results
- Integral Linearity
- PTT Error
- Noise Tolerance
- Algorithm Robustness
- Conclusions
- References
- Fractal-Based Brain State Recognition from EEG in Human Computer Interaction
- Introduction
- Related Work
- Neurofeedback Systems
- Emotion Recognition Algorithms
- Spatio-Temporal Approach
- 3D Mapping of EEG
- Fractal-Based Approach
- Implementation
- Pre-processing
- Features Extraction
- Classification Algorithms
- Applications
- 3D Mapping of EEG
- EEG-Based Serious Games
- Emotion-Based Digital Experience
- Conclusions
- References
- Understanding Cerebral Activations during the Observation of Marketing Stimuli: A Neuroelectrical Perspective
- Introduction
- Temporal Patterns of Cortical Activity
- Frequency Patterns of Cortical Activity and Connectivity
- Steady-State Visually Evoked Potentials
- Conclusions
- References
- PART IV Health Informatics
- Semantic-Based Conformance Checking of Computer Interpretable Medical Guidelines
- Introduction
- Chronic Cough Guideline Recommendations
- DECLARE Model
- Semantic Model Checking
- Scenario-Based Analysis
- Related Work
- Conclusions
- References
- REST-Style Architecture and the Development of Mobile Health Care Solutions
- Introduction
- APIs for Mobile Applications
- VHR Mobile Application
- Security Concerns
- Client Platforms
- Backend Infrastructure
- VHR REST API
- API Design and Development
- API Operations
- REST API Extension
- Testing and Integration
- Conclusions
- References
- Biomedical Literature Retrieval Based on Patient Information
- Introduction
- Background
- Patient-Based Literature Retrieval and Integration
- Characteristics Extraction
- Query Generation
- Integration and Presentation
- Use Cases: Diabetes and Arterial Hypertension
- Results
- Conclusions and Future Lines
- References
- Evaluating Information Security Effectiveness with Health Professionals
- Introduction
- Narrow and Holistic Definition
- Effectiveness of Information Security?
- Outline of Paper
- Related Work
- The MaPSaF Instrument
- Development of Information Security Employee's Evaluation (ISEE)
- Literature Review
- Expert Review
- Use of the ISEE
- One Workshop Highlighted
- Contributions, Limitations and Future Research
- References
- Using Social Network Analysis to Study the Knowledge Sharing Patterns of Health Professionals Using Web 2.0 Tools
- Introduction
- Experiential Healthcare Knowledge Sharing Framework
- Background
- Social Network Analysis
- Network Visualization
- VECoN System
- Visualization
- Methods
- Data
- Results
- SNA
- Visualization
- Discussion
- Isolates
- Centrality
- Blockmodeling
- Visualization
- Conclusions
- References
- A Semantic-Based Platform for Medical Image Storage and Sharing Using the Grid
- Introduction
- Storage and Sharing System Overview
- Local Data Storage and Sharing
- Global Data Sharing on GRID Using LFC and AMGA
- High Level Features
- Semantic Layer
- Image Processing Layer
- Query Composition
- Client Interface
- Concluding Remarks
- References
- Securing the Access to Electronic Health Records on Mobile Phones
- Introduction
- Problem Scenario
- Wallet Architecture
- General Idea
- System Model
- Generic Wallet-Based e-Health Architecture
- Mobile TruWallet
- Wallet Prototype on Nokia N900
- Mobile TruWallet Architecture
- ObC Architecture
- Implementation
- Related Work
- Conclusions and Future Work
- References
- Similarity Grouping of Human Sleep Recordings Using EEG and ECG
- Introduction
- Scope of the Paper
- Related Work
- Methodology
- Data
- Clustering
- Statistical Significance
- Results
- Salient Properties of Sleep Type Clusters
- EEG Characteristics of Sleep Type Clusters
- ECG and Heart Rate Variability (HRV)
- Conclusions and Future Work
- References
- Author Index
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