Mitochondrial Function: Volume 547
Published on 12. November 2014
Book
Hardback
506 pages
978-0-12-801415-8 (ISBN)
Description
This new volume of Methods in Enzymology continues the legacy of this premier serial with quality chapters authored by leaders in the field. Methods to assess mitochondrial function is of great interest to neuroscientists studying chronic forms of neurodegeneration, including Parkinson's, Alzheimer's, ALS, Huntington's and other triplet repeat diseases, but also to those working on acute conditions such as stroke and traumatic brain injury. This volume covers research methods on how to assess the life cycle of mitochondria including trafficking, fusion, fission, and degradation. Multiple perspectives on the complex and difficult problem of measurement of mitochondrial reactive oxygen species production with fluorescent indicators and techniques ranging in scope from measurements on isolated mitochondria to non-invasive imaging of metabolic function.
More details
Series
Language
English
Place of publication
San Diego
United States
Publishing group
Elsevier Science Publishing Co Inc
Target group
Professional and scholarly
Dimensions
Height: 229 mm
Width: 152 mm
Weight
970 gr
ISBN-13
978-0-12-801415-8 (9780128014158)
Copyright in bibliographic data and cover images is held by Nielsen Book Services Limited or by the publishers or by their respective licensors: all rights reserved.
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Persons
Anne N. Murphy, Ph.D. is currently an Associate Professor in the Department of Pharmacology within the medical school at the University of California, San Diego. She obtained her PhD from The George Washington University School of Medicine and Health Sciences in Biochemistry and Molecular Biology. Her post-doctoral studies were conducted at the Johns Hopkins Hospital and at The National Cancer Institute. Her career in both academic and biotechnology settings has focussed on mitochondrial bioenergetic function and the discovery of mitochondrial-targeted therapeutic strategies. She has particular interest in how mitochondrial metabolite and ion transport controls cell metabolism. David Chan is currently Professor of Biology at the California Institute of Technology. He graduated from Harvard College with a degree in Biochemical Sciences. He then joined the MD-PhD program at Harvard Medical School, completing his graduate studies with Philip Leder. His postdoctoral training was with Peter Kim at the Whitehead Institute for Biomedical Research at MIT. His lab's main interest is to understand the role of mitochondrial dynamics in cellular function and human physiology. Mitochondria are dynamic organelles that have many important functions in cells, including energy generation, metabolism, and regulation of cell death. A key feature of mitochondria is that they undergo cycles of fusion and fission, and his lab is trying to understand the role of these processes in controlling their function. In addition, several human diseases arise from a perturbation of these processes, and he hopes to understand the cellular mechanisms involved in disease pathogenesis.
Content
1. High-Content Functional Genomic Screening to Identify Novel Regulators of the PINK1-Parkin Pathway
Andy Cheuk-Him Ng, Stephen Baird and Robert A. Screaton
2. Measurement of Mitochondrial Turnover and Life Cycle using MitoTimer
Kyle M. Trudeau , Roberta A.Gottlieb and Orian S. Shirihai
3. Monitoring Mitophagy in Mammalian Cells
Yushan Zhu , Guo Chen, Linbo Chen, Du Feng, Lei Liu and Quan Chen
4. Photoactivatable Green Fluorescent Protein-Based Visualization and Quantification of Mitochondrial Fusion and Mitochondrial Network Complexity in Living Cells
Mariusz Karbowski, Megan M. Cleland and Brian Roelofs
5. Characterization of Mitochondrial Transport in Neurons
Bing Zhou, Mei-Yao Lin, Tao Sun, Adam L. Knight and Zu-Hang Sheng
6. Imaging of Mitochondrial Dynamics in Motor and Sensory Axons of Living Mice.
Irene Bolea, Wen-Biao Gan, Giovanni Manfedi and Jordi Magranel
7. Analyzing Mitochondrial Dynamics in Mouse Organotypic Slice Cultures
Anh H. Pham and David C. Chan
8. Analysis of Mitochondrial Traffic in Drosophila
Swathi Devireddy, Hyun Sung, Pin-Chao Liao, Elisabeth Garland-Kuntz and Peter J Hollenbeck
9. In Vivo Imaging of Mitochondria in Intact Zebrafish Larvae
Dominik Paquet , Gabriela Plucinska and Thomas Misgeld
10. The Use of MiniSOG in the Localization of Mitochondrial Proteins
Guy A. Perkins
11. Assessing the Function of Mitochondria-Associated ER Membranes
Estela Area-Gomez.
12. Measurement of ROS Homeostasis in Isolated Mitochondria
L. Tretter, and A. Ambrus
13. Use of Potentiometric Fluorophores in the Measurement of Mitochondrial Reactive Oxygen Species
Brian M. Polster , David G. Nicholls , Shealinna X. Ge and Brian A. Roelofs
14. Spatial, Temporal and Quantitative Manipulation of Intracellular Hydrogen Peroxide in Cultured Cells
Ishraq Alim, Renee E Haskew-Layton, Hossein Aleyasin, Hengchang Guo and Rajiv R Ratan
15. Biochemical and Biophysical Methods for Studying Mitochondrial Iron Metabolism
Gregory P. Holmes-Hampton, Wing-Hang Tong and Tracey A. Rouault
16. Analysis and Interpretation of Microplate-Based Oxygen Consumption and PH Data
Ajit S. Divakaruni, Alexander Paradyse1, David A. Ferrick, Anne N. Murphy ,and Martin Jastroch
17. Imaging Changes in the Cytosolic ATP-to-ADP ratio
Mathew Tantama and Gary Yellen
18. The Use of MiniSOG in the Localization of Mitochondrial Proteins
Carlos T. Moraes
19. Induced Pluripotent Stem Cell Derived Models for MtDNA Diseases
Riikka H Haemaelaeinen
20. The Use of 18F-BCPP-EF as a PET Probe for Complex I Activity in the Brain
Hideo Tsukada
21. MR OEF Imaging in MELAS
Sheng Xie
Andy Cheuk-Him Ng, Stephen Baird and Robert A. Screaton
2. Measurement of Mitochondrial Turnover and Life Cycle using MitoTimer
Kyle M. Trudeau , Roberta A.Gottlieb and Orian S. Shirihai
3. Monitoring Mitophagy in Mammalian Cells
Yushan Zhu , Guo Chen, Linbo Chen, Du Feng, Lei Liu and Quan Chen
4. Photoactivatable Green Fluorescent Protein-Based Visualization and Quantification of Mitochondrial Fusion and Mitochondrial Network Complexity in Living Cells
Mariusz Karbowski, Megan M. Cleland and Brian Roelofs
5. Characterization of Mitochondrial Transport in Neurons
Bing Zhou, Mei-Yao Lin, Tao Sun, Adam L. Knight and Zu-Hang Sheng
6. Imaging of Mitochondrial Dynamics in Motor and Sensory Axons of Living Mice.
Irene Bolea, Wen-Biao Gan, Giovanni Manfedi and Jordi Magranel
7. Analyzing Mitochondrial Dynamics in Mouse Organotypic Slice Cultures
Anh H. Pham and David C. Chan
8. Analysis of Mitochondrial Traffic in Drosophila
Swathi Devireddy, Hyun Sung, Pin-Chao Liao, Elisabeth Garland-Kuntz and Peter J Hollenbeck
9. In Vivo Imaging of Mitochondria in Intact Zebrafish Larvae
Dominik Paquet , Gabriela Plucinska and Thomas Misgeld
10. The Use of MiniSOG in the Localization of Mitochondrial Proteins
Guy A. Perkins
11. Assessing the Function of Mitochondria-Associated ER Membranes
Estela Area-Gomez.
12. Measurement of ROS Homeostasis in Isolated Mitochondria
L. Tretter, and A. Ambrus
13. Use of Potentiometric Fluorophores in the Measurement of Mitochondrial Reactive Oxygen Species
Brian M. Polster , David G. Nicholls , Shealinna X. Ge and Brian A. Roelofs
14. Spatial, Temporal and Quantitative Manipulation of Intracellular Hydrogen Peroxide in Cultured Cells
Ishraq Alim, Renee E Haskew-Layton, Hossein Aleyasin, Hengchang Guo and Rajiv R Ratan
15. Biochemical and Biophysical Methods for Studying Mitochondrial Iron Metabolism
Gregory P. Holmes-Hampton, Wing-Hang Tong and Tracey A. Rouault
16. Analysis and Interpretation of Microplate-Based Oxygen Consumption and PH Data
Ajit S. Divakaruni, Alexander Paradyse1, David A. Ferrick, Anne N. Murphy ,and Martin Jastroch
17. Imaging Changes in the Cytosolic ATP-to-ADP ratio
Mathew Tantama and Gary Yellen
18. The Use of MiniSOG in the Localization of Mitochondrial Proteins
Carlos T. Moraes
19. Induced Pluripotent Stem Cell Derived Models for MtDNA Diseases
Riikka H Haemaelaeinen
20. The Use of 18F-BCPP-EF as a PET Probe for Complex I Activity in the Brain
Hideo Tsukada
21. MR OEF Imaging in MELAS
Sheng Xie