Frontiers of Computational Science

Plenary & Keynote Papers.- Computational Methods Combining Large Eddy Simulation with Approximate Wall-Layer Models for Predicting Separated Turbulent Near-Wall Flows.- Numerical Experimentation: A Third Way to Study Nature.- Recent Computational Developments in Quantum Conductance and Field Emission of Carbon Nanotubes.- Energy Landscapes of Protein Self-Assembly: Lessons from Native Topology-Based Models.- A Brief Introduction to Krylov Space Methods for Solving Linear Systems.- Recent Developments in DNS and Modeling of Rotating Wall-Turbulent Shear Flows with Heat Transfer.- Contribution of Computational Biology and Structural Genomics to Understand Genome and Transcriptome.- Invited Papers.- Achromatic and Chromatic Visual Information Processing and Discrete Wavelets.- On Decaying Two-Dimensional Turbulence in a Circular Container.- A Study Toward Improving Accuracy of Large Scale Industrial Turbulent Flow Computations.- Direct Numerical Simulations of Turbulent Premixed Flames with Realistic Kinetic Mechanisms.- Variational Monte Carlo Studies of Superconductivity in ?-BEDT-TTF Salts.- Simulation for Measurements of Electric Properties of Surface Nanostructures.- Ultra-Fast Dynamics in Nanocarbon Explored by TDDFT-MD Simulations.- Heat Transport in Nanoscale Objects: Classical to Quantum.- Aromaticity Driven Rupture of CN and CC Multiple Bonds.- Protein Function Prediction in Proteomics Era.- What We can Learn about Protein Folding from Recent Progress in Structure Prediction.- Brownian Dynamics Approach to Protein Folding.- A Fourth Type of Secondary Structure Breaker.- Neighborhood Parallel Simulated Annealing.- New Computing System Architecture for Simulation of Biological Signal Transduction Networks.- Convergence Analysis of GMRES Methods for Least SquaresProblems.- A Numerical Method for Calculating the Green's Function Arising from Electronic Structure Theory.- General Contribution.- Direct Numerical Simulation of Turbulent Channel Flow Imposed with Spanwise Couette Flow.- Reynolds-Number Dependence of Transport Barriers in Chaotic Mixing.- On the Treatment of Long-range Electrostatic Interactions in Biomolecular Simulations.- DNS of Turbulent Channel Flow Obstructed by Rectangular Ribs.- Source Models of Gravity Waves in an F-plane Shallow Water System.- Direct Numerical Simulation of Neutrally Stratified Ekman Boundary Layer.- Application of the Renormalization Group Analysis to a Noisy Kuramoto-Sivashinsky Equation and its Numerical Simulation.- Wavelet-Based Statistics in High-Resolution Direct Numerical Simulations of Three-Dimensional Homogeneous Isotropic Turbulence.- Hydrophobic Hydration on Nanometer Length Scale.- Ultra-Fast Genome Wide Simulation of Biological Signal Transduction Networks: Starpack.- Molecular Dynamics Study on Interaction of C-Component Dislocation Loop and Edge Dislocation in ?-Zirconium.- Theoretical Analysis of Intramolecular Interaction.- Effect of Nanoscale Structure of Solid Surface on Moving Droplet.- Proximity Effect in NS Junctions in the Presence of Anderson Impurities.- Wiedemann-Franz Law in Diffusive Normal Metal/p-Wave Superconductor Junctions.- Nodal Structures of Wave Functions in Chaotic Billiards.- Elongation of Water Residence Time at the Protein Interior in Aqueous Solution with Ectoine.- Analytical Model for Protein Folding.- Theoretical Research on Dynamics of the Genetic Toggle Switch.- Non-Condon Theory for the Energy Gap Dependence of Electron Transfer Rate.- Density Functional Molecular Orbital Calculations on Longer DNA-DNA and PNA-DNA Double Strands.- AParallel Computing Framework for Nonexperts of Computers: Easy Installation, Programming and Execution of Master-Worker Applications Using Spare Computing Power of PCs.- Derivation of TIS for Search Performance Quantification on HC Method.- Improvement of Search Performance of Genetic Algorithm Through Visualization of Search Process.- A Proposal for Analysis of SD Evaluation Data by Using Clustering Method Focused on Data Distribution.- Multiobjective Evolutionary RBF Networks and Its Application to Ensemble Learning.- A New Concept of Cerebral Autoregulation Using Mathematical Expressions.- Evolution Strategies on Desktop Grid Environment Using Scheduling Algorithms RR for Same Length Tasks.- Solution of Black-Scholes Equation By Using RBF Approximation.- Visualization of Differences on Two Subjects' Impression Words Based on Correlation of SD Data.- Evaluation of High Imaging Quality LCDs Which Features Moving Picture: Comparison using Stabilometers.- Template Translation for Multilingual Disaster Information System.- An Application of Double-Wayland Algorithm to Detect Anomalous Signals.