
Problems and Solutions in Biological Sequence Analysis
Cambridge University Press
Published on 4. September 2006
Book
Hardback
366 pages
978-0-521-84754-4 (ISBN)
Description
This book is the first of its kind to provide a large collection of bioinformatics problems with accompanying solutions. Notably, the problem set includes all of the problems offered in Biological Sequence Analysis, by Durbin et al. (Cambridge, 1998), widely adopted as a required text for bioinformatics courses at leading universities worldwide. Although many of the problems included in Biological Sequence Analysis as exercises for its readers have been repeatedly used for homework and tests, no detailed solutions for the problems were available. Bioinformatics instructors had therefore frequently expressed a need for fully worked solutions and a larger set of problems for use on courses. This book provides just that: following the same structure as Biological Sequence Analysis and significantly extending the set of workable problems, it will facilitate a better understanding of the contents of the chapters in BSA and will help its readers develop problem-solving skills that are vitally important for conducting successful research in the growing field of bioinformatics. All of the material has been class-tested by the authors at Georgia Tech, where the first ever MSc degree program in Bioinformatics was held.
More details
Language
English
Place of publication
Cambridge
United Kingdom
Target group
Professional and scholarly
College/higher education
Illustrations
Worked examples or Exercises; 27 Tables, unspecified; 27 Line drawings, unspecified
Dimensions
Height: 256 mm
Width: 177 mm
Thickness: 22 mm
Weight
867 gr
ISBN-13
978-0-521-84754-4 (9780521847544)
Copyright in bibliographic data and cover images is held by Nielsen Book Services Limited or by the publishers or by their respective licensors: all rights reserved.
Schweitzer Classification
Other editions
Additional editions

Mark Borodovsky | Svetlana Ekisheva
Problems and Solutions in Biological Sequence Analysis
E-Book
10/2007
1st Edition
Cambridge University Press
€44.49
Available for download

Mark Borodovsky | Svetlana Ekisheva
Problems and Solutions in Biological Sequence Analysis
Book
09/2006
Cambridge University Press
€73.20
Shipment within 15-20 days
Persons
Mark Borodovsky is the Regents' Professor of Biology and Biomedical Engineering and Director of the Center for Bioinformatics and Computational Biology at Georgia Institute of Technology in Atlanta. He is the founder of the Georgia Tech M.Sc. and Ph.D. degree programs in Bioinformatics. His research interests are in bioinformatics and systems biology. He has taught Bioinformatics courses since 1994. Svetlana Ekisheva is a Research Scientist at the School of Biology, Georgia Institute of Technology, Atlanta. Her research interests are in bioinformatics, applied statistics and stochastic processes. Her expertise includes teaching probability theory and statistics at universities in Russia and in the USA.
Author
Georgia Institute of Technology
Georgia Institute of Technology
Content
Preface; 1. Introduction; 2. Pairwise alignment; 3. Markov chains and hidden Markov models; 4. Pairwise alignment using HMMs; 5. Profile HMMs for sequence families; 6. Multiple sequence alignment methods; 7. Building phylogenetic trees; 8. Probabilistic approaches to phylogeny; 9. Transformational grammars; 10. RNA structure analysis; 11. Background on probability.